Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MFSD8-239ENST00000641590 2479 ntBASIC6.06□□□□□ -1.44
CDH6P55285 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH6P55285 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 VN1R12P-201ENST00000403778 876 ntBASIC6.06□□□□□ -1.44
CDH6P55285 DEFA9P-201ENST00000433042 285 ntBASIC6.06□□□□□ -1.44
CDH6P55285 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH6P55285 AC015983.1-201ENST00000441577 373 ntBASIC6.06□□□□□ -1.44
CDH6P55285 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH6P55285 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH6P55285 RPL37P23-201ENST00000492641 294 ntBASIC6.06□□□□□ -1.44
CDH6P55285 SETP21-201ENST00000514799 892 ntBASIC6.06□□□□□ -1.44
CDH6P55285 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 WBP1LP3-201ENST00000523033 208 ntBASIC6.06□□□□□ -1.44
CDH6P55285 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH6P55285 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH6P55285 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH6P55285 AC060780.2-201ENST00000589047 198 ntBASIC6.06□□□□□ -1.44
CDH6P55285 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH6P55285 MIR6793-201ENST00000612376 63 ntBASIC6.06□□□□□ -1.44
CDH6P55285 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH6P55285 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH6P55285 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH6P55285 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH6P55285 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH6P55285 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 AC099521.1-201ENST00000482557 334 ntBASIC6.05□□□□□ -1.44
CDH6P55285 RN7SL193P-201ENST00000491708 276 ntBASIC6.05□□□□□ -1.44
CDH6P55285 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 AC079905.1-201ENST00000549280 475 ntBASIC6.05□□□□□ -1.44
CDH6P55285 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH6P55285 AC126615.2-201ENST00000553003 515 ntBASIC6.05□□□□□ -1.44
CDH6P55285 HNRNPCP1-201ENST00000556181 766 ntBASIC6.05□□□□□ -1.44
CDH6P55285 AC091078.2-201ENST00000557145 559 ntBASIC6.05□□□□□ -1.44
CDH6P55285 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH6P55285 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 AC021422.1-201ENST00000621212 473 ntBASIC6.05□□□□□ -1.44
CDH6P55285 AC069542.2-201ENST00000624816 216 ntBASIC6.05□□□□□ -1.44
CDH6P55285 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 IFIT1P1-201ENST00000400497 1449 ntBASIC6.05□□□□□ -1.44
CDH6P55285 CAP1P2-201ENST00000417455 1409 ntBASIC6.05□□□□□ -1.44
CDH6P55285 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH6P55285 AC027088.4-201ENST00000611559 1947 ntBASIC6.05□□□□□ -1.44
CDH6P55285 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDH6P55285 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH6P55285 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CDH6P55285 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CDH6P55285 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH6P55285 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 RNA5SP433-201ENST00000364491 114 ntBASIC6.04□□□□□ -1.44
CDH6P55285 RN7SKP186-201ENST00000365371 303 ntBASIC6.04□□□□□ -1.44
CDH6P55285 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH6P55285 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 RPL24P2-201ENST00000421023 475 ntBASIC6.04□□□□□ -1.44
CDH6P55285 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH6P55285 AC093166.4-201ENST00000457867 318 ntBASIC6.04□□□□□ -1.44
CDH6P55285 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH6P55285 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH6P55285 LDHBP3-201ENST00000514909 822 ntBASIC6.04□□□□□ -1.44
CDH6P55285 RN7SKP70-201ENST00000516655 271 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 TOMM20P1-201ENST00000534518 427 ntBASIC6.04□□□□□ -1.44
CDH6P55285 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH6P55285 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms