Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.91□□□□□ -1.3
EPHB3P54753 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
EPHB3P54753 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.91□□□□□ -1.3
EPHB3P54753 AC053481.2-202ENST00000582394 1500 ntBASIC6.91□□□□□ -1.3
EPHB3P54753 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.91□□□□□ -1.3
EPHB3P54753 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
EPHB3P54753 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
EPHB3P54753 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 MTCO1P25-201ENST00000414449 1799 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 EPS15P1-202ENST00000459691 2071 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 SNORD35A-201ENST00000363389 86 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 RNU6-618P-201ENST00000363518 112 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 OR7E156P-201ENST00000400303 464 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AL355379.1-201ENST00000405542 640 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AMZ2P2-201ENST00000406819 1057 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC017035.1-201ENST00000411999 1115 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 RAB9AP4-201ENST00000415230 609 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 VN1R31P-201ENST00000417498 730 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 AL606495.1-201ENST00000422100 813 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 OR5M12P-201ENST00000423388 929 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 FABP5P1-201ENST00000423401 411 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC005345.1-201ENST00000431868 217 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 NMNAT1P2-201ENST00000435192 860 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 MTCYBP39-201ENST00000437562 491 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 NPM1P33-201ENST00000438918 872 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 XKRY2-201ENST00000442362 1093 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 RPL5P10-201ENST00000445207 894 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC117395.1-201ENST00000487390 403 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 RPL12P7-201ENST00000493832 494 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 H3F3AP3-201ENST00000497682 407 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 PPM1AP1-201ENST00000502740 1135 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC131392.1-201ENST00000506490 633 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC018797.1-201ENST00000510791 255 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC117532.1-201ENST00000514638 323 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 RNA5SP441-201ENST00000516809 88 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 AC130364.2-201ENST00000528639 604 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC092375.1-201ENST00000550410 637 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC026826.3-201ENST00000561747 158 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AL078601.3-201ENST00000573303 535 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 OOSP1P2-201ENST00000579644 351 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC084373.1-201ENST00000603311 235 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC067838.1-201ENST00000606064 577 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC096586.2-201ENST00000610260 441 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AC022106.1-201ENST00000612834 766 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 uc_338.31-201ENST00000615595 186 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 MIR6085-201ENST00000618314 110 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AL359715.5-201ENST00000623431 443 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
EPHB3P54753 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 AC099654.13-201ENST00000639774 207 ntBASIC6.9□□□□□ -1.3
EPHB3P54753 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.9□□□□□ -1.3
EPHB3P54753 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.9□□□□□ -1.3
EPHB3P54753 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.9□□□□□ -1.3
EPHB3P54753 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.9□□□□□ -1.31
EPHB3P54753 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHB3P54753 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
EPHB3P54753 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.9□□□□□ -1.31
EPHB3P54753 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHB3P54753 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHB3P54753 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms