Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
COPAP53621 RN7SKP269-201ENST00000365545 319 ntBASIC6.47□□□□□ -1.37
COPAP53621 MIR421-201ENST00000365696 85 ntBASIC6.47□□□□□ -1.37
COPAP53621 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COPAP53621 LCN1P2-201ENST00000372030 223 ntBASIC6.47□□□□□ -1.37
COPAP53621 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 RNU1-46P-201ENST00000384425 164 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 GTF3AP1-201ENST00000416942 1004 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 AC073464.3-201ENST00000422564 712 ntBASIC6.47□□□□□ -1.37
COPAP53621 CYCSP52-201ENST00000422857 310 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC245884.2-201ENST00000426257 404 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 MTCO1P45-201ENST00000431457 267 ntBASIC6.47□□□□□ -1.37
COPAP53621 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 AC003989.1-201ENST00000434569 565 ntBASIC6.47□□□□□ -1.37
COPAP53621 PNKDP1-201ENST00000435914 430 ntBASIC6.47□□□□□ -1.37
COPAP53621 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 AC010240.2-201ENST00000445363 1205 ntBASIC6.47□□□□□ -1.37
COPAP53621 RN7SL165P-201ENST00000477476 291 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.47□□□□□ -1.37
COPAP53621 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.47□□□□□ -1.37
COPAP53621 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 HMGB1P47-201ENST00000511281 589 ntBASIC6.47□□□□□ -1.37
COPAP53621 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 IGHV1-14-201ENST00000523391 241 ntBASIC6.47□□□□□ -1.37
COPAP53621 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 QTRT1P1-201ENST00000604344 1078 ntBASIC6.47□□□□□ -1.37
COPAP53621 HMGB1P51-201ENST00000605166 638 ntBASIC6.47□□□□□ -1.37
COPAP53621 OR51C1P-201ENST00000608504 942 ntBASIC6.47□□□□□ -1.37
COPAP53621 AP001437.1-201ENST00000608783 456 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 AC022400.9-201ENST00000623633 273 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC097372.4-201ENST00000625025 466 ntBASIC6.47□□□□□ -1.37
COPAP53621 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.47□□□□□ -1.37
COPAP53621 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COPAP53621 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 AP001284.1-201ENST00000528393 2118 ntBASIC6.47□□□□□ -1.37
COPAP53621 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COPAP53621 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COPAP53621 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
COPAP53621 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
COPAP53621 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
COPAP53621 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
COPAP53621 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COPAP53621 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.46□□□□□ -1.37
COPAP53621 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.46□□□□□ -1.37
COPAP53621 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COPAP53621 AC062022.1-201ENST00000451026 1684 ntBASIC6.46□□□□□ -1.37
COPAP53621 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.46□□□□□ -1.38
COPAP53621 RNA5SP350-201ENST00000363298 111 ntBASIC6.46□□□□□ -1.38
COPAP53621 RNU6-1176P-201ENST00000390955 107 ntBASIC6.46□□□□□ -1.38
COPAP53621 AL050335.1-201ENST00000396909 869 ntBASIC6.46□□□□□ -1.38
COPAP53621 RPS17P17-201ENST00000419392 409 ntBASIC6.46□□□□□ -1.38
COPAP53621 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.46□□□□□ -1.38
COPAP53621 AC073508.1-201ENST00000428866 656 ntBASIC6.46□□□□□ -1.38
COPAP53621 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 AC112492.2-201ENST00000432774 1030 ntBASIC6.46□□□□□ -1.38
COPAP53621 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 DNAJA1P5-201ENST00000440278 943 ntBASIC6.46□□□□□ -1.38
COPAP53621 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 AL645936.1-201ENST00000441979 518 ntBASIC6.46□□□□□ -1.38
COPAP53621 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COPAP53621 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.46□□□□□ -1.38
COPAP53621 AP002345.1-201ENST00000456493 928 ntBASIC6.46□□□□□ -1.38
COPAP53621 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COPAP53621 RN7SL643P-201ENST00000471845 291 ntBASIC6.46□□□□□ -1.38
COPAP53621 AC022336.1-201ENST00000475510 337 ntBASIC6.46□□□□□ -1.38
COPAP53621 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.46□□□□□ -1.38
COPAP53621 RPL12P30-201ENST00000488389 499 ntBASIC6.46□□□□□ -1.38
COPAP53621 AP002453.1-201ENST00000492327 668 ntBASIC6.46□□□□□ -1.38
COPAP53621 AC104629.1-201ENST00000494226 508 ntBASIC6.46□□□□□ -1.38
COPAP53621 AC022206.1-201ENST00000495947 347 ntBASIC6.46□□□□□ -1.38
COPAP53621 SNX18P24-201ENST00000505249 671 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms