Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A12P48065 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A12P48065 AC090236.2-201ENST00000587933 1101 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC6A12P48065 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 AC091167.5-201ENST00000605689 894 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 AC108673.3-201ENST00000609183 335 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC6A12P48065 AP001052.1-201ENST00000626421 99 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 AC007159.1-201ENST00000566529 4706 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A12P48065 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A12P48065 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A12P48065 AC130360.2-201ENST00000533477 1556 ntBASIC5.71□□□□□ -1.5
SLC6A12P48065 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A12P48065 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SLC6A12P48065 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC6A12P48065 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC6A12P48065 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC6A12P48065 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC093909.5-201ENST00000621839 1799 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SLC6A12P48065 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 MTHFD2P5-201ENST00000320415 844 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC007068.1-201ENST00000396690 844 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC016739.1-201ENST00000405359 345 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC6A12P48065 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC007679.3-201ENST00000434035 414 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC004129.2-201ENST00000457229 287 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC023194.2-201ENST00000465398 406 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC098847.1-201ENST00000473094 348 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC093719.1-201ENST00000480427 441 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 RBBP4P1-201ENST00000502424 1276 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AP001960.1-201ENST00000506494 658 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 ST13P12-201ENST00000508958 1094 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 RN7SKP238-201ENST00000516483 249 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC091078.2-201ENST00000557145 559 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC090826.1-203ENST00000569235 490 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC008507.3-201ENST00000585753 472 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 AC245014.3-201ENST00000618589 347 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 AC093225.1-201ENST00000506867 1408 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 RNF19BPY-201ENST00000458209 1550 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC6A12P48065 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC6A12P48065 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 FBXL21-201ENST00000297158 1305 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC6A12P48065 ZNF658B-201ENST00000602828 3408 ntBASIC5.7□□□□□ -1.5
SLC6A12P48065 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC6A12P48065 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.69□□□□□ -1.5
SLC6A12P48065 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SLC6A12P48065 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 CASC19-238ENST00000641523 1558 ntBASIC5.69□□□□□ -1.5
SLC6A12P48065 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 COX6B1P3-201ENST00000312310 260 ntBASIC5.69□□□□□ -1.5
SLC6A12P48065 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC6A12P48065 RN7SKP78-201ENST00000364711 318 ntBASIC5.69□□□□□ -1.5
SLC6A12P48065 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC6A12P48065 RFESDP1-201ENST00000422350 461 ntBASIC5.69□□□□□ -1.5
SLC6A12P48065 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms