Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.69□□□□□ -1.34
CIITAP33076 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.69□□□□□ -1.34
CIITAP33076 TRIM51DP-201ENST00000529746 596 ntBASIC6.69□□□□□ -1.34
CIITAP33076 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.69□□□□□ -1.34
CIITAP33076 SNRPGP1-201ENST00000553864 222 ntBASIC6.69□□□□□ -1.34
CIITAP33076 DPPA3P2-202ENST00000557188 1219 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.69□□□□□ -1.34
CIITAP33076 RPL12P48-201ENST00000605620 304 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AC073575.2-201ENST00000614212 627 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AL139099.4-201ENST00000614802 114 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AL445670.1-201ENST00000618889 801 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AC018659.2-201ENST00000624690 715 ntBASIC6.69□□□□□ -1.34
CIITAP33076 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.69□□□□□ -1.34
CIITAP33076 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CIITAP33076 PDZK1P1-202ENST00000425209 1350 ntBASIC6.69□□□□□ -1.34
CIITAP33076 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.68□□□□□ -1.34
CIITAP33076 AL662795.2-201ENST00000624252 3706 ntBASIC6.68□□□□□ -1.34
CIITAP33076 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CIITAP33076 AC068769.1-201ENST00000474767 2426 ntBASIC6.68□□□□□ -1.34
CIITAP33076 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CIITAP33076 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 SNX18P3-202ENST00000565670 1750 ntBASIC6.68□□□□□ -1.34
CIITAP33076 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CIITAP33076 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CIITAP33076 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.68□□□□□ -1.34
CIITAP33076 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.68□□□□□ -1.34
CIITAP33076 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.68□□□□□ -1.34
CIITAP33076 AL365220.1-201ENST00000432923 399 ntBASIC6.68□□□□□ -1.34
CIITAP33076 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.68□□□□□ -1.34
CIITAP33076 AL157777.1-201ENST00000468100 304 ntBASIC6.68□□□□□ -1.34
CIITAP33076 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 RPS17P15-201ENST00000475609 349 ntBASIC6.68□□□□□ -1.34
CIITAP33076 PFN1P6-201ENST00000476786 399 ntBASIC6.68□□□□□ -1.34
CIITAP33076 RN7SL57P-201ENST00000493687 290 ntBASIC6.68□□□□□ -1.34
CIITAP33076 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.68□□□□□ -1.34
CIITAP33076 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.68□□□□□ -1.34
CIITAP33076 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.68□□□□□ -1.34
CIITAP33076 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CIITAP33076 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.68□□□□□ -1.34
CIITAP33076 TXNP4-201ENST00000575018 310 ntBASIC6.68□□□□□ -1.34
CIITAP33076 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CIITAP33076 AC107993.1-201ENST00000591343 684 ntBASIC6.68□□□□□ -1.34
CIITAP33076 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 AC100767.2-201ENST00000604840 693 ntBASIC6.68□□□□□ -1.34
CIITAP33076 AC015982.1-201ENST00000608113 465 ntBASIC6.68□□□□□ -1.34
CIITAP33076 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CIITAP33076 PARP4P2-201ENST00000446672 3326 ntBASIC6.68□□□□□ -1.34
CIITAP33076 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CIITAP33076 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.67□□□□□ -1.34
CIITAP33076 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.67□□□□□ -1.34
CIITAP33076 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CIITAP33076 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CIITAP33076 AL451142.1-201ENST00000375867 775 ntBASIC6.67□□□□□ -1.34
CIITAP33076 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 CASKP1-201ENST00000412870 582 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.67□□□□□ -1.34
CIITAP33076 AK3P5-201ENST00000432033 519 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 ACA64.1-201ENST00000459171 127 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 AC090568.1-201ENST00000509499 856 ntBASIC6.67□□□□□ -1.34
CIITAP33076 GAPDHP71-201ENST00000511530 1003 ntBASIC6.67□□□□□ -1.34
CIITAP33076 RN7SKP288-201ENST00000516227 268 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AP001804.1-201ENST00000526868 919 ntBASIC6.67□□□□□ -1.34
CIITAP33076 HMGN2P36-201ENST00000529541 409 ntBASIC6.67□□□□□ -1.34
CIITAP33076 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.67□□□□□ -1.34
CIITAP33076 EIF1AXP2-201ENST00000555940 413 ntBASIC6.67□□□□□ -1.34
CIITAP33076 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.67□□□□□ -1.34
CIITAP33076 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms