Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CPS1P31327 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CPS1P31327 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CPS1P31327 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.14□□□□□ -1.11
CPS1P31327 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CPS1P31327 GTF2IP4-201ENST00000453092 2054 ntBASIC8.14□□□□□ -1.11
CPS1P31327 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CPS1P31327 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CPS1P31327 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CPS1P31327 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.13□□□□□ -1.11
CPS1P31327 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 VDAC2P4-201ENST00000452925 711 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.13□□□□□ -1.11
CPS1P31327 NDUFA5P9-201ENST00000472609 340 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC139365.2-201ENST00000517972 253 ntBASIC8.13□□□□□ -1.11
CPS1P31327 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 AC012616.1-201ENST00000600294 197 ntBASIC8.13□□□□□ -1.11
CPS1P31327 RNF138P2-201ENST00000603490 592 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC004890.3-201ENST00000605566 1095 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 AC245389.2-201ENST00000616023 576 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC242843.1-201ENST00000618702 573 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC009704.2-201ENST00000618739 483 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC073869.10-201ENST00000642016 354 ntBASIC8.13□□□□□ -1.11
CPS1P31327 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CPS1P31327 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.13□□□□□ -1.11
CPS1P31327 AC009831.5-201ENST00000624000 3189 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CPS1P31327 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.13□□□□□ -1.11
CPS1P31327 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.13□□□□□ -1.11
CPS1P31327 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 RN7SKP104-201ENST00000362605 328 ntBASIC8.13□□□□□ -1.11
CPS1P31327 RNA5SP335-201ENST00000363817 110 ntBASIC8.13□□□□□ -1.11
CPS1P31327 RPS16P5-201ENST00000406501 404 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AL590139.1-201ENST00000416267 400 ntBASIC8.13□□□□□ -1.11
CPS1P31327 COX6CP17-201ENST00000421389 185 ntBASIC8.13□□□□□ -1.11
CPS1P31327 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 AL138878.2-201ENST00000440581 1241 ntBASIC8.13□□□□□ -1.11
CPS1P31327 RN7SL447P-201ENST00000494711 245 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.13□□□□□ -1.11
CPS1P31327 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CPS1P31327 OR5AZ1P-201ENST00000527448 943 ntBASIC8.13□□□□□ -1.11
CPS1P31327 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.13□□□□□ -1.11
CPS1P31327 MIR3934-201ENST00000579806 107 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AL023583.1-201ENST00000607518 1143 ntBASIC8.13□□□□□ -1.11
CPS1P31327 AC000068.2-201ENST00000608816 460 ntBASIC8.13□□□□□ -1.11
CPS1P31327 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 AP003119.3-201ENST00000566747 4192 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AC006213.6-201ENST00000623722 4179 ntBASIC8.12□□□□□ -1.11
CPS1P31327 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CPS1P31327 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 AC011504.1-201ENST00000623331 4103 ntBASIC8.12□□□□□ -1.11
CPS1P31327 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CPS1P31327 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CPS1P31327 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CPS1P31327 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CPS1P31327 NENFP1-201ENST00000419476 466 ntBASIC8.12□□□□□ -1.11
CPS1P31327 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AC073648.4-201ENST00000442655 781 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AC079922.1-201ENST00000443291 359 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC8.12□□□□□ -1.11
CPS1P31327 AC134698.5-201ENST00000519444 336 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.12□□□□□ -1.11
CPS1P31327 AC063977.5-201ENST00000601044 974 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AC087283.1-201ENST00000604029 1074 ntBASIC8.12□□□□□ -1.11
CPS1P31327 AL118522.2-201ENST00000616045 615 ntBASIC8.12□□□□□ -1.11
CPS1P31327 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CPS1P31327 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CPS1P31327 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CPS1P31327 THAP12P9-201ENST00000503971 2360 ntBASIC8.11□□□□□ -1.11
CPS1P31327 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CPS1P31327 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CPS1P31327 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.11□□□□□ -1.11
CPS1P31327 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CPS1P31327 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CPS1P31327 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CPS1P31327 AC092821.2-201ENST00000545710 2042 ntBASIC8.11□□□□□ -1.11
CPS1P31327 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CPS1P31327 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CPS1P31327 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms