Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RN7SKP128-201ENST00000364270 303 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN6P29350 MTND4LP21-201ENST00000415303 295 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 AC007679.3-201ENST00000434035 414 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN6P29350 OR3D1P-201ENST00000438288 955 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN6P29350 ACA64.4-201ENST00000459070 127 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 OR7E99P-201ENST00000505750 922 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 RN7SKP288-201ENST00000516227 268 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN6P29350 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN6P29350 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN6P29350 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN6P29350 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN6P29350 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 AC002310.3-201ENST00000569728 723 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN6P29350 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 SNX18P12-201ENST00000624821 759 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN6P29350 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 CR383656.5-201ENST00000547616 1340 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 Z95114.1-201ENST00000624264 14574 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 AC138907.8-201ENST00000623981 2256 ntBASIC5.67□□□□□ -1.5
PTPN6P29350 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN6P29350 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN6P29350 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN6P29350 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 AC007342.5-201ENST00000571340 2142 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 THAP12P9-201ENST00000503971 2360 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 AC104966.1-201ENST00000467010 1464 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 AC025470.1-201ENST00000510053 2032 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 RNA5SP110-201ENST00000362638 115 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN6P29350 PSMD10P2-201ENST00000432890 672 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 RPL5P10-201ENST00000445207 894 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN6P29350 MTND6P5-201ENST00000448266 512 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPN6P29350 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC009879.1-201ENST00000520029 839 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 AC090888.3-201ENST00000558917 509 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPN6P29350 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 MIR4310-201ENST00000582950 57 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 uc_338.26-201ENST00000612659 160 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AC022960.2-201ENST00000616300 666 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 AL357562.1-201ENST00000624911 609 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 AC087516.1-201ENST00000561236 2428 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPN6P29350 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 CDC27P2-201ENST00000425026 1922 ntBASIC5.66□□□□□ -1.5
PTPN6P29350 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTPN6P29350 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN6P29350 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPN6P29350 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPN6P29350 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms