Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ERCC3P19447 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC004815.1-201ENST00000484185 331 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC010486.2-201ENST00000505572 483 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AC096754.1-201ENST00000508904 818 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 RNA5SP318-201ENST00000516352 92 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC121758.1-202ENST00000556917 658 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC069366.1-201ENST00000583159 838 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 RPL29P33-201ENST00000587474 316 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AL035411.2-201ENST00000604022 421 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AL445423.1-201ENST00000609941 536 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AC092106.3-201ENST00000611308 722 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 AC024257.5-201ENST00000612739 531 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 MIR7109-201ENST00000613748 65 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
ERCC3P19447 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.93□□□□□ -1.14
ERCC3P19447 AC018717.1-201ENST00000457712 1505 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC129502.1-201ENST00000623261 1654 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 RNU4-7P-201ENST00000364758 141 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 RNA5SP172-201ENST00000365061 118 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 RPL5P5-201ENST00000392009 893 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 TAF13P2-201ENST00000416876 286 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 PTP4A1P1-201ENST00000420539 515 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC021876.1-201ENST00000425959 359 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 RPL5P34-201ENST00000426545 891 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AL121916.1-201ENST00000429405 308 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 LDHAP2-201ENST00000437325 985 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.92□□□□□ -1.14
ERCC3P19447 AKR1D1P1-201ENST00000457236 936 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 NMNAT1P3-201ENST00000457517 888 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC069528.1-202ENST00000482888 637 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC011037.1-201ENST00000483964 558 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.92□□□□□ -1.14
ERCC3P19447 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 AC117522.2-201ENST00000510049 657 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC7.92□□□□□ -1.14
ERCC3P19447 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.92□□□□□ -1.14
ERCC3P19447 AC009955.2-201ENST00000597288 542 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 WBP1LP12-201ENST00000604449 331 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AP005329.3-201ENST00000609924 686 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC009120.7-201ENST00000623452 780 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.92□□□□□ -1.14
ERCC3P19447 AP001153.1-201ENST00000641024 338 ntBASIC7.92□□□□□ -1.14
ERCC3P19447 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
ERCC3P19447 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
ERCC3P19447 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms