Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARMC4P1-201ENST00000438905 707 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AL645936.1-201ENST00000441979 518 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 GAPDHP23-201ENST00000444823 993 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 CEACAMP11-201ENST00000455211 583 ntBASIC5.96□□□□□ -1.46
PCNAP12004 RPL7L1P3-201ENST00000455249 689 ntBASIC5.96□□□□□ -1.46
PCNAP12004 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 H3F3AP5-201ENST00000475267 429 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AC135999.1-201ENST00000478962 479 ntBASIC5.96□□□□□ -1.46
PCNAP12004 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 NACAP5-201ENST00000509863 636 ntBASIC5.96□□□□□ -1.46
PCNAP12004 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 KHDC1P1-201ENST00000511053 508 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 AC027026.1-201ENST00000532323 742 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
PCNAP12004 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.96□□□□□ -1.46
PCNAP12004 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.96□□□□□ -1.46
PCNAP12004 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 AC007423.1-201ENST00000605009 627 ntBASIC5.96□□□□□ -1.46
PCNAP12004 RPSAP75-201ENST00000605848 301 ntBASIC5.96□□□□□ -1.46
PCNAP12004 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.96□□□□□ -1.46
PCNAP12004 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCNAP12004 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PCNAP12004 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
PCNAP12004 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.95□□□□□ -1.46
PCNAP12004 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.95□□□□□ -1.46
PCNAP12004 AL137141.1-201ENST00000624622 4836 ntBASIC5.95□□□□□ -1.46
PCNAP12004 NAMPTP1-201ENST00000440465 2514 ntBASIC5.95□□□□□ -1.46
PCNAP12004 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCNAP12004 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 MIR191-201ENST00000384873 92 ntBASIC5.95□□□□□ -1.46
PCNAP12004 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCNAP12004 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PCNAP12004 AL034417.1-201ENST00000399343 800 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AL358178.1-201ENST00000407698 397 ntBASIC5.95□□□□□ -1.46
PCNAP12004 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 AC096644.3-201ENST00000416788 338 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.95□□□□□ -1.46
PCNAP12004 VN1R20P-201ENST00000425215 966 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 AL691517.1-201ENST00000440833 1235 ntBASIC5.95□□□□□ -1.46
PCNAP12004 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.95□□□□□ -1.46
PCNAP12004 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.95□□□□□ -1.46
PCNAP12004 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.95□□□□□ -1.46
PCNAP12004 RPS15AP29-201ENST00000445539 400 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.95□□□□□ -1.46
PCNAP12004 MORF4L1P4-201ENST00000450245 976 ntBASIC5.95□□□□□ -1.46
PCNAP12004 HIGD1AP16-201ENST00000450986 258 ntBASIC5.95□□□□□ -1.46
PCNAP12004 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.95□□□□□ -1.46
PCNAP12004 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.95□□□□□ -1.46
PCNAP12004 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 SNX18P24-201ENST00000505249 671 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC138409.2-202ENST00000507274 458 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC025470.1-201ENST00000510053 2032 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.95□□□□□ -1.46
PCNAP12004 AC140134.1-201ENST00000511830 3544 ntBASIC5.95□□□□□ -1.46
PCNAP12004 MTND1P36-201ENST00000522384 936 ntBASIC5.95□□□□□ -1.46
PCNAP12004 OR8K2P-201ENST00000524645 927 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
PCNAP12004 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.95□□□□□ -1.46
PCNAP12004 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.95□□□□□ -1.46
PCNAP12004 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 NPM1P5-201ENST00000557228 838 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC005632.2-201ENST00000564271 828 ntBASIC5.95□□□□□ -1.46
PCNAP12004 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 AC090651.1-201ENST00000567865 634 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC090079.2-201ENST00000575289 768 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC020916.2-201ENST00000591242 360 ntBASIC5.95□□□□□ -1.46
PCNAP12004 RNU6-84P-201ENST00000607737 102 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms