Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC064862.5-201ENST00000440618 334 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.84□□□□□ -1.63
CTSDP07339 AL645936.1-201ENST00000441979 518 ntBASIC4.84□□□□□ -1.63
CTSDP07339 RPS7P3-201ENST00000443360 580 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 MEMO1P4-201ENST00000453590 386 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC004890.1-201ENST00000461005 181 ntBASIC4.84□□□□□ -1.63
CTSDP07339 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTSDP07339 RN7SL612P-201ENST00000497704 295 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.84□□□□□ -1.63
CTSDP07339 AC095052.1-201ENST00000509955 863 ntBASIC4.84□□□□□ -1.63
CTSDP07339 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTSDP07339 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.84□□□□□ -1.63
CTSDP07339 AC138517.1-201ENST00000515724 568 ntBASIC4.84□□□□□ -1.63
CTSDP07339 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 AC110056.1-201ENST00000525759 911 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC124891.1-201ENST00000536322 519 ntBASIC4.84□□□□□ -1.63
CTSDP07339 TDGP1-201ENST00000543961 1229 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.84□□□□□ -1.63
CTSDP07339 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.84□□□□□ -1.63
CTSDP07339 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 AC090286.3-201ENST00000573133 187 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 AL162574.1-201ENST00000615702 950 ntBASIC4.84□□□□□ -1.63
CTSDP07339 AL357562.1-201ENST00000624911 609 ntBASIC4.84□□□□□ -1.63
CTSDP07339 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.84□□□□□ -1.63
CTSDP07339 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTSDP07339 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTSDP07339 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTSDP07339 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTSDP07339 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTSDP07339 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTSDP07339 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CTSDP07339 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.64
CTSDP07339 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 AC002525.1-201ENST00000624392 1622 ntBASIC4.83□□□□□ -1.64
CTSDP07339 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.83□□□□□ -1.64
CTSDP07339 AC018717.1-201ENST00000457712 1505 ntBASIC4.83□□□□□ -1.64
CTSDP07339 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
CTSDP07339 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.83□□□□□ -1.64
CTSDP07339 YWHAZP4-201ENST00000392459 708 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 RPSAP65-201ENST00000429660 595 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AL359265.1-201ENST00000440296 795 ntBASIC4.83□□□□□ -1.64
CTSDP07339 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.83□□□□□ -1.64
CTSDP07339 AC015983.1-201ENST00000441577 373 ntBASIC4.83□□□□□ -1.64
CTSDP07339 SEPT14P12-201ENST00000442280 560 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.83□□□□□ -1.64
CTSDP07339 KF459542.1-201ENST00000450908 553 ntBASIC4.83□□□□□ -1.64
CTSDP07339 CBX1P2-201ENST00000453841 458 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AC099670.1-201ENST00000455141 783 ntBASIC4.83□□□□□ -1.64
CTSDP07339 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.83□□□□□ -1.64
CTSDP07339 AC105384.2-201ENST00000508433 640 ntBASIC4.83□□□□□ -1.64
CTSDP07339 NACAP5-201ENST00000509863 636 ntBASIC4.83□□□□□ -1.64
CTSDP07339 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.83□□□□□ -1.64
CTSDP07339 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 MIR3157-201ENST00000578688 85 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 WBP1LP11-201ENST00000586141 328 ntBASIC4.83□□□□□ -1.64
CTSDP07339 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.83□□□□□ -1.64
CTSDP07339 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 AC010503.3-201ENST00000594355 540 ntBASIC4.83□□□□□ -1.64
CTSDP07339 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.83□□□□□ -1.64
CTSDP07339 MIR6813-201ENST00000621638 56 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AC089999.3-201ENST00000622440 577 ntBASIC4.83□□□□□ -1.64
CTSDP07339 AC021766.1-201ENST00000624404 741 ntBASIC4.83□□□□□ -1.64
CTSDP07339 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.83□□□□□ -1.64
CTSDP07339 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CTSDP07339 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTSDP07339 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.82□□□□□ -1.64
CTSDP07339 RPS2P45-201ENST00000469997 2057 ntBASIC4.82□□□□□ -1.64
CTSDP07339 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.82□□□□□ -1.64
CTSDP07339 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTSDP07339 AP004607.3-201ENST00000530354 3915 ntBASIC4.82□□□□□ -1.64
CTSDP07339 RPL11P4-201ENST00000332269 436 ntBASIC4.82□□□□□ -1.64
CTSDP07339 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.82□□□□□ -1.64
CTSDP07339 MIR191-201ENST00000384873 92 ntBASIC4.82□□□□□ -1.64
CTSDP07339 RN7SKP38-201ENST00000410782 309 ntBASIC4.82□□□□□ -1.64
CTSDP07339 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms