Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GTF3AP1-201ENST00000416942 1004 ntBASIC6.38□□□□□ -1.39
VTNP04004 NME1P1-201ENST00000420914 382 ntBASIC6.38□□□□□ -1.39
VTNP04004 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 RN7SL177P-201ENST00000476596 299 ntBASIC6.38□□□□□ -1.39
VTNP04004 AL035690.1-201ENST00000490892 383 ntBASIC6.38□□□□□ -1.39
VTNP04004 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.38□□□□□ -1.39
VTNP04004 AC021678.3-201ENST00000517893 476 ntBASIC6.38□□□□□ -1.39
VTNP04004 MRPS16P1-201ENST00000523462 412 ntBASIC6.38□□□□□ -1.39
VTNP04004 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.38□□□□□ -1.39
VTNP04004 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 AC079414.3-201ENST00000612986 1090 ntBASIC6.38□□□□□ -1.39
VTNP04004 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.38□□□□□ -1.39
VTNP04004 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 RARSP1-201ENST00000542842 1418 ntBASIC6.38□□□□□ -1.39
VTNP04004 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
VTNP04004 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.38□□□□□ -1.39
VTNP04004 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
VTNP04004 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
VTNP04004 AP004607.3-201ENST00000530354 3915 ntBASIC6.38□□□□□ -1.39
VTNP04004 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTNP04004 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VTNP04004 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
VTNP04004 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.37□□□□□ -1.39
VTNP04004 AP002833.3-201ENST00000625075 2265 ntBASIC6.37□□□□□ -1.39
VTNP04004 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VTNP04004 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 AL391361.1-201ENST00000405580 489 ntBASIC6.37□□□□□ -1.39
VTNP04004 OR3A2-201ENST00000408891 1076 ntBASIC6.37□□□□□ -1.39
VTNP04004 RMRPP5-201ENST00000411156 267 ntBASIC6.37□□□□□ -1.39
VTNP04004 Z68694.1-201ENST00000413929 841 ntBASIC6.37□□□□□ -1.39
VTNP04004 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.37□□□□□ -1.39
VTNP04004 AK3P5-201ENST00000432033 519 ntBASIC6.37□□□□□ -1.39
VTNP04004 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 FMO7P-201ENST00000436045 768 ntBASIC6.37□□□□□ -1.39
VTNP04004 AC005297.1-201ENST00000444765 862 ntBASIC6.37□□□□□ -1.39
VTNP04004 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.37□□□□□ -1.39
VTNP04004 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 AC004129.2-201ENST00000457229 287 ntBASIC6.37□□□□□ -1.39
VTNP04004 EIF3LP3-201ENST00000495197 822 ntBASIC6.37□□□□□ -1.39
VTNP04004 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.37□□□□□ -1.39
VTNP04004 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.37□□□□□ -1.39
VTNP04004 MIR3176-201ENST00000582210 90 ntBASIC6.37□□□□□ -1.39
VTNP04004 AC008115.3-201ENST00000614874 549 ntBASIC6.37□□□□□ -1.39
VTNP04004 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.37□□□□□ -1.39
VTNP04004 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.37□□□□□ -1.39
VTNP04004 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTNP04004 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
VTNP04004 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.37□□□□□ -1.39
VTNP04004 WBP11P1-201ENST00000562560 1931 ntBASIC6.37□□□□□ -1.39
VTNP04004 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 FBXL21-201ENST00000297158 1305 ntBASIC6.36□□□□□ -1.39
VTNP04004 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 MIR143-201ENST00000385300 106 ntBASIC6.36□□□□□ -1.39
VTNP04004 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 AC015983.1-201ENST00000441577 373 ntBASIC6.36□□□□□ -1.39
VTNP04004 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.36□□□□□ -1.39
VTNP04004 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
VTNP04004 DUTP7-201ENST00000507982 486 ntBASIC6.36□□□□□ -1.39
VTNP04004 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.36□□□□□ -1.39
VTNP04004 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VTNP04004 AC244502.2-201ENST00000543361 851 ntBASIC6.36□□□□□ -1.39
VTNP04004 AC090022.1-201ENST00000546569 311 ntBASIC6.36□□□□□ -1.39
VTNP04004 IGBP1P1-201ENST00000554337 1009 ntBASIC6.36□□□□□ -1.39
VTNP04004 AL049872.1-201ENST00000556323 322 ntBASIC6.36□□□□□ -1.39
VTNP04004 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.36□□□□□ -1.39
VTNP04004 AC096996.1-201ENST00000563813 325 ntBASIC6.36□□□□□ -1.39
VTNP04004 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.36□□□□□ -1.39
VTNP04004 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.36□□□□□ -1.39
VTNP04004 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.36□□□□□ -1.39
VTNP04004 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms