Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC234771.4-201ENST00000441416 730 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 LINC02210-201ENST00000444561 288 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC012512.1-201ENST00000446594 718 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 RN7SL326P-201ENST00000477493 296 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 SNX18P24-201ENST00000505249 671 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 RN7SKP196-201ENST00000516267 345 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 SEPT10P1-201ENST00000517342 1162 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 BCAS2P1-201ENST00000528022 632 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC024267.2-201ENST00000582737 417 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 COX6CP7-201ENST00000597056 208 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AL139124.1-201ENST00000609123 421 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC079248.1-201ENST00000427568 1546 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC133552.1-201ENST00000569988 4007 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC092634.1-201ENST00000366505 199 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 U3.52-201ENST00000384034 216 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 RNA5SP91-201ENST00000390902 119 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 U3.28-201ENST00000391249 210 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AL590635.1-201ENST00000406314 586 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 RNA5SP155-201ENST00000411154 129 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 NPM1P40-201ENST00000412758 733 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC006509.1-201ENST00000420788 634 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 CDC42P6-201ENST00000421246 576 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PSAT1P4-201ENST00000466500 526 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 RN7SL643P-201ENST00000471845 291 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PFN1P6-201ENST00000476786 399 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 RN7SL655P-201ENST00000486087 298 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 MINOS1P4-201ENST00000515470 318 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC005519.1-201ENST00000554490 601 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC027796.1-201ENST00000575593 512 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC073046.2-201ENST00000604756 527 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AL137000.1-201ENST00000610528 1244 ntBASIC4.38□□□□□ -1.71
HLA-DQA1P01909 AC010998.3-201ENST00000613871 631 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms