Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC073310.1-201ENST00000423226 1033 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 MTCYBP32-201ENST00000427945 1084 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 RPL31P11-202ENST00000454082 372 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC018645.1-201ENST00000505003 109 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 MTCO3P27-201ENST00000514397 196 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC131935.1-201ENST00000524621 333 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 OR4A17P-201ENST00000526032 904 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AL133399.1-201ENST00000527476 298 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC084851.2-201ENST00000530377 364 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 OR4A40P-201ENST00000533878 948 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC037479.1-201ENST00000558361 625 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 MIR3189-201ENST00000578735 73 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC024267.2-201ENST00000582737 417 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 MIR6070-201ENST00000613967 103 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC090772.4-201ENST00000623599 362 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AP003485.1-201ENST00000625093 753 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 IMMTP1-201ENST00000435590 2219 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQA2P01906 CASC19-261ENST00000641853 1638 ntBASIC5.56□□□□□ -1.52
HLA-DQA2P01906 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC073365.1-203ENST00000641055 1992 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC092692.1-201ENST00000623625 2595 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 RNU4-64P-201ENST00000410795 131 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 BX119321.1-201ENST00000428912 797 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC046176.1-201ENST00000435260 1170 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 GTF2IP14-201ENST00000441415 586 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 HMGN1P32-201ENST00000441744 256 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 GAPDHP37-201ENST00000442317 968 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC016908.1-201ENST00000442571 1219 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 RPS27AP3-201ENST00000453803 454 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AL355032.1-201ENST00000472981 438 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 RN7SL790P-201ENST00000474043 298 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 RN7SL369P-201ENST00000477138 299 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC008410.1-201ENST00000483777 339 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC139713.1-202ENST00000512366 460 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AP003355.1-201ENST00000518956 587 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC092865.1-201ENST00000544395 1023 ntBASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQA2P01906 AC090651.1-201ENST00000567865 634 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms