Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
UPK1AO00322 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
UPK1AO00322 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC096775.1-201ENST00000437724 448 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC023271.1-201ENST00000445936 1090 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 RN7SL197P-201ENST00000466981 299 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC090602.1-201ENST00000469695 252 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 GLUD1P3-202ENST00000508551 200 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 RNA5SP340-201ENST00000517132 107 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AP003396.4-201ENST00000527574 265 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC093524.1-201ENST00000564266 1094 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 GARSP1-201ENST00000570895 719 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.5□□□□□ -1.53
UPK1AO00322 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.5□□□□□ -1.53
UPK1AO00322 AC145423.1-201ENST00000605712 336 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.5□□□□□ -1.53
UPK1AO00322 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 RPS2P45-201ENST00000469997 2057 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.5□□□□□ -1.53
UPK1AO00322 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UPK1AO00322 CASC19-238ENST00000641523 1558 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 MFSD8-239ENST00000641590 2479 ntBASIC5.5□□□□□ -1.53
UPK1AO00322 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UPK1AO00322 LYARP1-201ENST00000436977 1501 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UPK1AO00322 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 RN7SKP78-201ENST00000364711 318 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UPK1AO00322 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
UPK1AO00322 AC016739.1-201ENST00000405359 345 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AL354890.1-201ENST00000413730 346 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 RPL6P21-201ENST00000418672 846 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 OR5W1P-201ENST00000423705 938 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AMYP1-201ENST00000440059 1023 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 CST12P-201ENST00000457644 362 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AC068228.1-201ENST00000461723 211 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 OR51A1P-201ENST00000511110 946 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 AC007956.1-201ENST00000555623 542 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 CYCSP38-201ENST00000559840 322 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.49□□□□□ -1.53
UPK1AO00322 AC090286.3-201ENST00000573133 187 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.49□□□□□ -1.53
UPK1AO00322 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.49□□□□□ -1.53
UPK1AO00322 AL157762.1-201ENST00000619612 415 ntBASIC5.49□□□□□ -1.53
UPK1AO00322 AC073592.6-201ENST00000624271 415 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms