Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 CR383658.1-201ENST00000514609 734 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 AC005632.2-201ENST00000564271 828 ntBASIC6.08□□□□□ -1.44
CCDC188H7C350 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC188H7C350 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC188H7C350 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CCDC188H7C350 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC188H7C350 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 MTCO1P22-201ENST00000604619 1360 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 UGT2B24P-201ENST00000514441 1597 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC188H7C350 OR7E25P-201ENST00000344844 931 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC188H7C350 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 OR5W1P-201ENST00000423705 938 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 AC130360.1-201ENST00000425489 1117 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AL136231.1-201ENST00000429407 730 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC188H7C350 MEMO1P4-201ENST00000453590 386 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 RN7SL267P-201ENST00000485107 261 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 AC105384.2-201ENST00000508433 640 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 AC130365.2-201ENST00000525882 1201 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC188H7C350 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC188H7C350 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AC027796.1-201ENST00000575593 512 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 AC027216.1-201ENST00000577726 685 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AC145423.1-201ENST00000605712 336 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC188H7C350 AL122023.1-201ENST00000622847 530 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 OR8A1-204ENST00000642111 1145 ntBASIC6.07□□□□□ -1.44
CCDC188H7C350 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC188H7C350 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC188H7C350 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 BRAFP1-201ENST00000445336 2703 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CCDC188H7C350 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC130360.2-201ENST00000533477 1556 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 RN7SKP69-201ENST00000365390 305 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC188H7C350 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC188H7C350 OR52N3P-201ENST00000413417 934 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC188H7C350 MTND6P5-201ENST00000448266 512 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC188H7C350 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC023245.1-201ENST00000468501 517 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC117500.1-201ENST00000497352 755 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC188H7C350 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 TRAV11-201ENST00000539512 339 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC188H7C350 AL049874.4-201ENST00000557593 255 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 GARSP1-201ENST00000570895 719 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 TXNP4-201ENST00000575018 310 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AP000919.1-201ENST00000582850 985 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AC063977.7-201ENST00000594454 337 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AC107905.1-201ENST00000616204 426 ntBASIC6.06□□□□□ -1.44
CCDC188H7C350 AC241377.1-201ENST00000619797 406 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms