Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 ADAM5-202ENST00000399789 1942 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 OR10R3P-201ENST00000361688 942 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RNU105B-201ENST00000364478 208 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RNA5SP140-201ENST00000364524 92 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AL079341.1-201ENST00000404701 1207 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RN7SKP121-201ENST00000410842 305 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 CTSL3P-202ENST00000412179 788 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RPS15AP30-201ENST00000420976 390 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 CHCHD4P5-201ENST00000436684 427 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RNU1-88P-201ENST00000459274 128 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RN7SL72P-201ENST00000460697 269 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RPL38P3-201ENST00000484463 213 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RN7SL267P-201ENST00000485107 261 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC021193.1-201ENST00000511607 420 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 RPL41P2-201ENST00000544920 409 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC068408.1-201ENST00000577406 1144 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 MIR4472-2-201ENST00000582069 67 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC114477.1-201ENST00000605097 605 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC126474.2-201ENST00000623268 1750 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC127071.2-201ENST00000623293 527 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC006453.3-201ENST00000635891 377 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 SAMMSON-227ENST00000642114 1199 ntBASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RBFOX3A6NFN3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RBFOX3A6NFN3 MFSD8-239ENST00000641590 2479 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 RN7SKP78-201ENST00000364711 318 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 EEF1GP6-201ENST00000402309 905 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 NPM1P40-201ENST00000412758 733 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AL020997.1-201ENST00000446554 349 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 AC012512.1-201ENST00000446594 718 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 OR52E3P-201ENST00000452083 936 ntBASIC4.58□□□□□ -1.68
RBFOX3A6NFN3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms