Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC110716.2-201ENST00000563865 3945 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL034546.1-201ENST00000623740 3693 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC232271.1-201ENST00000602455 2715 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 NENFP1-201ENST00000419476 466 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL022331.1-201ENST00000429025 477 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RPS23P6-201ENST00000466136 431 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 SCARNA6.1-201ENST00000516989 238 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC063977.5-201ENST00000601044 974 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC093388.1-201ENST00000609166 430 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RN7SL544P-201ENST00000617232 284 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AP005431.1-201ENST00000618479 319 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RN7SL763P-201ENST00000620922 284 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 OR13C1P-202ENST00000641378 2919 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC140479.2-201ENST00000421567 3130 ntBASIC5.68□□□□□ -1.5
TRBV5-4A0A0C4DH59 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 NEPNP-201ENST00000404786 1371 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC023490.2-201ENST00000359859 470 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 MIR375-201ENST00000362103 64 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 SNORA64.1-201ENST00000362600 132 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 RNA5SP30-201ENST00000365552 115 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 OR5W1P-201ENST00000423705 938 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC084754.1-201ENST00000463466 464 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 RPS23P2-201ENST00000463671 415 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC094085.1-201ENST00000468914 584 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC022215.1-201ENST00000481770 362 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 RPS7P6-201ENST00000485777 579 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 DUTP1-201ENST00000493631 470 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 SUMO2P19-201ENST00000518920 295 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC139697.1-201ENST00000548429 745 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AP001357.1-201ENST00000586304 1053 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 AC015802.2-201ENST00000589690 189 ntBASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TRBV5-4A0A0C4DH59 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms