Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 MIR130A-201ENST00000385274 89 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AL357752.1-201ENST00000412817 349 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC019205.1-201ENST00000421830 730 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC138761.5-201ENST00000433967 325 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 GAPDHP48-201ENST00000436626 961 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC009963.3-201ENST00000458090 486 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 GAPDHP71-201ENST00000511530 1003 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 SETP21-201ENST00000514799 892 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 RNA5SP340-201ENST00000517132 107 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 WBP1LP3-201ENST00000523033 208 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AP003396.4-201ENST00000527574 265 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC006530.1-201ENST00000555980 571 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC090236.2-201ENST00000587933 1101 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 UGT2B24P-201ENST00000514441 1597 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC027088.4-201ENST00000611559 1947 ntBASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRAV27A0A087WT01 AC123769.1-201ENST00000530992 3192 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 RNA5SP514-201ENST00000363717 111 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 BX276092.6-201ENST00000430476 250 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 TUBB4BP6-201ENST00000437576 479 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 EIF5AP4-201ENST00000441206 465 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 RPS23P9-201ENST00000448848 438 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 CFL1P4-201ENST00000451536 498 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 BX276092.8-201ENST00000455722 250 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 Z83838.1-202ENST00000456225 839 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 CST12P-201ENST00000457644 362 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC023194.2-201ENST00000465398 406 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 RN7SL57P-201ENST00000493687 290 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 GLUD1P3-202ENST00000508551 200 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 LDHAP1-201ENST00000509421 992 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 HSD3BP3-201ENST00000514706 994 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC137627.1-201ENST00000545761 289 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC139697.1-201ENST00000548429 745 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 MIR744-201ENST00000578242 98 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 MIR5010-201ENST00000582846 120 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 NANOGP3-201ENST00000605855 286 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC005618.4-201ENST00000625053 554 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL161912.4-201ENST00000623889 2468 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AC092451.3-201ENST00000625067 1343 ntBASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAV27A0A087WT01 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms