Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC011933.2-201ENST00000578539 2790 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 RNA5SP273-201ENST00000362484 113 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 TRGV5P-201ENST00000419915 354 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC019205.1-201ENST00000421830 730 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 EIF5AP4-201ENST00000441206 465 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL122020.1-201ENST00000472287 459 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC128716.1-201ENST00000475129 166 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC099521.1-201ENST00000482557 334 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 EIF4E2P2-201ENST00000492033 736 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC122718.2-201ENST00000505325 591 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 GAPDHP71-201ENST00000511530 1003 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC136777.2-201ENST00000522979 358 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 WBP1LP3-201ENST00000523033 208 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AC079905.1-201ENST00000549280 475 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 AP001052.1-201ENST00000626421 99 ntBASIC5.8□□□□□ -1.48
TREX1Q9NSU2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RNU1-150P-201ENST00000362491 162 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RNGTTP1-201ENST00000420965 728 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AMYP1-201ENST00000440059 1023 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RPL5P10-201ENST00000445207 894 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 Z83838.1-202ENST00000456225 839 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RN7SL57P-201ENST00000493687 290 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 Vault.2-201ENST00000516519 98 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 SNORA81.2-201ENST00000516868 170 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 IGLV3-30-201ENST00000524362 298 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AP003080.1-202ENST00000526526 915 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 PCNAP4-201ENST00000532690 730 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AL035661.1-201ENST00000620459 1144 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC024884.1-201ENST00000620583 399 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 AC022919.1-201ENST00000624979 626 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 PDZK1P1-202ENST00000425209 1350 ntBASIC5.79□□□□□ -1.48
TREX1Q9NSU2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.79□□□□□ -1.48
TREX1Q9NSU2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TREX1Q9NSU2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms