Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC091305.2-201ENST00000624049 1576 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 SNORA11.5-201ENST00000408163 128 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 RPL34P27-201ENST00000428810 349 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 KCTD9P1-201ENST00000430462 1167 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 RPS10P18-201ENST00000442662 495 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 OR7E116P-201ENST00000448529 957 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC009120.1-201ENST00000493458 473 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 NENFP3-201ENST00000503735 313 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 SCARNA6.1-201ENST00000516989 238 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 PRELID3BP3-201ENST00000584963 545 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC027243.2-201ENST00000602530 724 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 AL049840.6-201ENST00000604583 345 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 AP005431.1-201ENST00000618479 319 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 AC011933.2-201ENST00000578539 2790 ntBASIC6.16□□□□□ -1.42
CISHQ9NSE2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 AL159987.1-201ENST00000347911 293 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC023490.2-201ENST00000359859 470 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 MIR1282-201ENST00000408865 101 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 NIFKP3-201ENST00000417799 865 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 RPS3P2-201ENST00000421346 701 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 RPSAP37-201ENST00000470913 821 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 RPL32P33-201ENST00000487023 394 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 SNORA70.20-201ENST00000516848 126 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC021678.3-201ENST00000517893 476 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 IGKV2-4-201ENST00000523070 340 ntBASIC6.15□□□□□ -1.42
CISHQ9NSE2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CISHQ9NSE2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.15□□□□□ -1.42
CISHQ9NSE2 KYNUP3-201ENST00000574386 1341 ntBASIC6.15□□□□□ -1.43
CISHQ9NSE2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CISHQ9NSE2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CISHQ9NSE2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CISHQ9NSE2 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.15□□□□□ -1.43
CISHQ9NSE2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CISHQ9NSE2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CISHQ9NSE2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CISHQ9NSE2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 OR56A4-201ENST00000330728 1209 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 IPPKP1-201ENST00000422501 768 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 VN1R21P-201ENST00000426703 765 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 AL590399.2-201ENST00000427536 309 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC084754.1-201ENST00000463466 464 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 UBFD1P1-201ENST00000473259 814 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 RN7SL570P-201ENST00000484405 292 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 DUTP1-201ENST00000493631 470 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC074255.1-201ENST00000511259 501 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC015802.2-201ENST00000589690 189 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.14□□□□□ -1.43
CISHQ9NSE2 AC100767.2-201ENST00000604840 693 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.14□□□□□ -1.43
CISHQ9NSE2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms