Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC008521.2-201ENST00000591021 259 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC096947.1-201ENST00000603233 470 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC100767.2-201ENST00000604840 693 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AL591167.1-201ENST00000607321 456 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC004477.3-201ENST00000614061 590 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 MIR6729-201ENST00000618194 65 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 AP003485.1-201ENST00000625093 753 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 AC008627.1-201ENST00000517511 1704 ntBASIC7.07□□□□□ -1.28
VTA1Q9NP79 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VTA1Q9NP79 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.07□□□□□ -1.28
VTA1Q9NP79 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 ICE2P1-201ENST00000512800 1849 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 RNA5SP477-201ENST00000362639 119 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 RNU1-134P-201ENST00000362935 165 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 RNA5SP510-201ENST00000364697 99 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 RNU6-1000P-201ENST00000391066 106 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AL353692.2-201ENST00000407054 335 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 U3.43-201ENST00000410734 213 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 MORF4L1P7-201ENST00000426038 703 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 CDY8P-201ENST00000428380 1279 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 MRPL50P1-201ENST00000431951 384 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC245517.2-201ENST00000442890 346 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC073109.1-201ENST00000445066 978 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AL606517.1-201ENST00000446914 387 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 CDY20P-201ENST00000447528 1279 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 MGAT2P1-201ENST00000449718 797 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 CST12P-201ENST00000457644 362 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 TRAV31-201ENST00000502780 342 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 OR5H7P-201ENST00000514084 930 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 RNA5SP271-201ENST00000516700 88 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC084337.1-201ENST00000524809 686 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC027243.2-201ENST00000602530 724 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 AP000864.1-201ENST00000609424 650 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 TMEM30CP-203ENST00000637814 1035 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 MIR4302-201ENST00000638058 60 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 AC112255.1-201ENST00000624070 2493 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.06□□□□□ -1.28
VTA1Q9NP79 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.06□□□□□ -1.28
VTA1Q9NP79 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VTA1Q9NP79 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 WBP11P1-201ENST00000562560 1931 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms