Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AP002884.5-201ENST00000595053 1132 ntBASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AL451049.1-201ENST00000608672 497 ntBASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC022106.1-201ENST00000612834 766 ntBASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 MIR6726-201ENST00000613751 61 ntBASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 AC130304.1-201ENST00000622942 2385 ntBASIC3.94□□□□□ -1.78
SND1-IT1Q9HBX3 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 OFD1P15Y-201ENST00000411536 1392 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC123912.3-201ENST00000600907 1367 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AL133243.2-201ENST00000610331 1621 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RNA5SP346-201ENST00000363541 121 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 SNORA70.6-201ENST00000383934 134 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 SNORA79B-201ENST00000410557 148 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AL139135.1-201ENST00000412675 209 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 DHFRP2-201ENST00000414224 547 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC079809.1-201ENST00000415468 276 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RPS7P8-201ENST00000418311 581 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 BMS1P11-201ENST00000442351 885 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 CYCSP51-201ENST00000443545 318 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 POU5F1P5-201ENST00000445059 658 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 BMS1P9-201ENST00000457640 885 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RN7SL836P-201ENST00000476140 296 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RPL12P31-201ENST00000478433 450 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 GM2AP2-201ENST00000491764 562 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RN7SL350P-201ENST00000492591 299 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AP000859.1-201ENST00000525536 307 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AP002004.1-206ENST00000532441 876 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC103855.4-201ENST00000533158 265 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC019322.1-201ENST00000571869 389 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC100832.2-201ENST00000582080 776 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AL031429.2-201ENST00000602605 649 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 MIR8082-201ENST00000612488 81 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 AL355974.3-201ENST00000617383 467 ntBASIC3.93□□□□□ -1.78
SND1-IT1Q9HBX3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms