Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC093770.1-201ENST00000511559 571 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AC093878.1-201ENST00000515630 432 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 HNRNPCP1-201ENST00000556181 766 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AC233702.7-202ENST00000582941 211 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AC011492.1-201ENST00000600023 315 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 RPS4XP21-201ENST00000603814 750 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 QTRT1P1-201ENST00000604344 1078 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AP000676.4-201ENST00000624659 623 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AL132640.3-201ENST00000630473 177 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AC073488.9-201ENST00000631601 754 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 ZNF402P-201ENST00000404435 3100 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 OR10AB1P-202ENST00000641219 1686 ntBASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.01□□□□□ -1.45
AMBRA1Q9C0C7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC004023.1-201ENST00000561473 1744 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC011455.2-201ENST00000599320 3336 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RNA5SP321-201ENST00000362722 111 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL590635.1-201ENST00000406314 586 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RN7SKP205-201ENST00000410999 307 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RMRPP5-201ENST00000411156 267 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL158050.1-201ENST00000416077 457 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL359092.1-201ENST00000417156 265 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 VN1R31P-201ENST00000417498 730 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL606490.7-201ENST00000433136 191 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC242426.1-201ENST00000435270 960 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 E2F6P3-201ENST00000441743 743 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 HMGN1P32-201ENST00000441744 256 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC245517.2-201ENST00000442890 346 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 GAPDHP20-201ENST00000444107 1007 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 VN1R38P-201ENST00000450265 887 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RSU1P1-201ENST00000453416 441 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL034369.1-201ENST00000453808 477 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC103563.5-201ENST00000455643 364 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 SNX18P26-201ENST00000458433 740 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC099340.1-201ENST00000475247 599 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 SETP6-201ENST00000479329 568 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 METTL15P1-201ENST00000481421 1045 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 HMGB1P3-201ENST00000502802 616 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AK4P6-201ENST00000505168 528 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 SUMO2P5-201ENST00000506790 245 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC119751.5-201ENST00000514077 770 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC010476.1-201ENST00000519111 851 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms