Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 ST13P12-201ENST00000508958 1094 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 MIR2117-201ENST00000516780 80 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC007346.2-201ENST00000564816 892 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC013244.1-201ENST00000604279 193 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 AC092681.3-201ENST00000609463 678 ntBASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
UPF3BQ9BZI7 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
UPF3BQ9BZI7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 MIR130B-202ENST00000385018 82 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 RPS3P2-201ENST00000421346 701 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC079355.1-201ENST00000421770 223 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AL445928.1-201ENST00000435545 222 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 KRT8P51-201ENST00000438938 274 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 DNAJC19P5-201ENST00000443295 316 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AL445466.1-201ENST00000448432 357 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 RPL31P15-201ENST00000449770 338 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 FRG2FP-204ENST00000453982 852 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 RPL12P39-201ENST00000455456 496 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC004129.2-201ENST00000457229 287 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 TRIM77BP-201ENST00000524985 1119 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC090022.1-201ENST00000546569 311 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC126615.2-201ENST00000553003 515 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 GARSP1-201ENST00000570895 719 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AP005119.1-201ENST00000580956 292 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AP001357.1-201ENST00000586304 1053 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC073389.3-201ENST00000609434 935 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC004801.6-201ENST00000616571 978 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 AC103703.1-201ENST00000634783 663 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 DNM1P47-203ENST00000571780 12667 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 MFSD8-219ENST00000641228 2559 ntBASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
UPF3BQ9BZI7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AC087516.1-201ENST00000561236 2428 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 SLC20A1P1-201ENST00000413906 956 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 TRIM60P16-201ENST00000444048 694 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 MYO5BP2-201ENST00000449815 1277 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 RBBP4P1-201ENST00000502424 1276 ntBASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.01□□□□□ -1.29
UPF3BQ9BZI7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms