Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NTNG1-205ENST00000370068 4034 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 COX15-201ENST00000016171 2356 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 FCRL3-202ENST00000368186 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 GAB4-201ENST00000400588 2630 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 HHAT-209ENST00000545781 2864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ERMARD-204ENST00000392095 1908 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 WDPCP-201ENST00000272321 3392 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 STRADA-231ENST00000638708 2153 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP3-3Q9BYR6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 RCBTB2-202ENST00000430805 3179 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 ZNF419-206ENST00000426954 2319 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 FUT6-201ENST00000286955 2847 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 PMS2-206ENST00000441476 2730 ntTSL 5 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 AC092132.2-201ENST00000611227 2744 ntBASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
KRTAP3-3Q9BYR6 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 EPSTI1-202ENST00000313640 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 METTL1-201ENST00000257848 1096 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 MATN1-201ENST00000373765 3832 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF37CP-201ENST00000406795 241 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC126124.2-201ENST00000413542 321 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 BANF1P4-201ENST00000420029 270 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC112220.1-201ENST00000434628 355 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AL845321.1-201ENST00000444603 348 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC002472.1-201ENST00000450652 563 ntTSL 4 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PSMB3P2-201ENST00000457237 618 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL43P-201ENST00000463926 291 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC100832.1-201ENST00000471945 383 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL105P-201ENST00000475661 299 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC136632.1-201ENST00000477964 591 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL88P-201ENST00000480166 299 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AL157792.1-201ENST00000488281 530 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL638P-201ENST00000494527 290 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 FTH1P24-201ENST00000503502 462 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC120498.5-201ENST00000561757 299 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 PINLYP-204ENST00000562365 706 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 CYP4F10P-201ENST00000589560 752 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 MIR7845-201ENST00000618396 99 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 AC012486.1-201ENST00000625143 216 ntBASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC5.71□□□□□ -1.5
KRTAP3-3Q9BYR6 RBMX2-205ENST00000639890 871 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms