Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 AC119674.1-202ENST00000641333 1860 ntBASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC28BQ9BUN5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 RN7SKP78-201ENST00000364711 318 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 UBTFL2-201ENST00000411859 1191 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 MTND2P12-201ENST00000417560 1252 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 RNGTTP1-201ENST00000420965 728 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 RN7SL39P-201ENST00000462264 297 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC095052.1-201ENST00000509955 863 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 GAPDHP62-201ENST00000515313 990 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC124891.1-201ENST00000536322 519 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC025283.1-201ENST00000572039 734 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 HIRAP1-201ENST00000605318 787 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 NANOGP3-201ENST00000605855 286 ntBASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC28BQ9BUN5 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CCDC28BQ9BUN5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 RNU1-136P-201ENST00000384181 164 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 RNA5SP91-201ENST00000390902 119 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL035696.2-201ENST00000407941 709 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 VN1R21P-201ENST00000426703 765 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL158214.1-201ENST00000444423 404 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 EIF3LP2-201ENST00000457262 807 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC105036.1-201ENST00000566222 271 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 OR7E19P-202ENST00000589942 844 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL589765.6-201ENST00000601909 549 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL353729.2-201ENST00000605859 1249 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AL645933.2-201ENST00000606743 1207 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 Z95327.3-201ENST00000610385 572 ntBASIC5.71□□□□□ -1.5
CCDC28BQ9BUN5 AC068726.1-201ENST00000610993 341 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms