Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC015689.2-201ENST00000528172 1738 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 AC020633.1-201ENST00000468439 2247 ntBASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS33AQ96AX1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC007342.5-201ENST00000571340 2142 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC138907.8-201ENST00000623981 2256 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC026523.2-201ENST00000625039 7739 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RNA5SP346-201ENST00000363541 121 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RNA5SP85-201ENST00000365378 119 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RNU6-729P-201ENST00000384399 107 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AL157702.1-201ENST00000398764 426 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AL033519.1-201ENST00000407266 307 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 UBTFL2-201ENST00000411859 1191 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 ELOBP4-201ENST00000423418 296 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 NPM1P26-201ENST00000426339 738 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 KRT8P51-201ENST00000438938 274 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 EIF3LP2-201ENST00000457262 807 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RN7SL790P-201ENST00000474043 298 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 SNORD39.2-201ENST00000579995 76 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AL133406.3-201ENST00000606817 541 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC016583.1-201ENST00000624221 2431 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 AC003973.3-201ENST00000624863 2822 ntBASIC5.81□□□□□ -1.48
VPS33AQ96AX1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS33AQ96AX1 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 ZNF37CP-201ENST00000406795 241 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC073410.1-201ENST00000435125 589 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 CYCSP51-201ENST00000443545 318 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AL512593.1-201ENST00000444758 779 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 RPL23AP60-201ENST00000450011 454 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 STRADBP1-201ENST00000478954 1281 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 UGT2A3P7-201ENST00000510485 734 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SLC25A51P2-201ENST00000535708 889 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC068408.1-201ENST00000577406 1144 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AP001357.1-201ENST00000586304 1053 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC002069.2-201ENST00000603580 883 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 NDUFB9P1-201ENST00000604683 510 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 AC068726.1-201ENST00000610993 341 ntBASIC5.8□□□□□ -1.48
VPS33AQ96AX1 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS33AQ96AX1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms