Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 MIR7703-201ENST00000620784 77 ntBASIC9.46□□□□□ -0.9
TOPBP1Q92547 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC9.46□□□□□ -0.9
TOPBP1Q92547 CASC19-281ENST00000642118 1554 ntBASIC9.46□□□□□ -0.9
TOPBP1Q92547 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 AL590004.4-201ENST00000566733 7060 ntBASIC9.45□□□□□ -0.9
TOPBP1Q92547 USP9YP3-201ENST00000434481 1766 ntBASIC9.45□□□□□ -0.9
TOPBP1Q92547 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 RNU1-149P-201ENST00000390870 161 ntBASIC9.45□□□□□ -0.9
TOPBP1Q92547 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 FAM96AP1-201ENST00000430879 482 ntBASIC9.45□□□□□ -0.9
TOPBP1Q92547 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 AK3P5-201ENST00000432033 519 ntBASIC9.45□□□□□ -0.9
TOPBP1Q92547 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
TOPBP1Q92547 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TOPBP1Q92547 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOPBP1Q92547 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOPBP1Q92547 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AL731534.1-201ENST00000434711 269 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC093267.1-201ENST00000489176 961 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 DUTP1-201ENST00000493631 470 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC234771.5-201ENST00000600161 514 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
TOPBP1Q92547 AC092724.1-201ENST00000624623 3397 ntBASIC9.44□□□□□ -0.9
TOPBP1Q92547 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TOPBP1Q92547 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC018809.2-201ENST00000602436 3823 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AL353763.1-201ENST00000624467 1628 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC005618.1-201ENST00000606901 3148 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 AL034549.2-201ENST00000618285 3373 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 SNORA17.1-201ENST00000362945 126 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 RN7SL738P-201ENST00000470264 297 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 API5-210ENST00000534600 1760 ntTSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TOPBP1Q92547 OR55B1P-203ENST00000641518 2602 ntBASIC9.43□□□□□ -0.9
TOPBP1Q92547 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TOPBP1Q92547 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 AP004289.1-201ENST00000436307 2205 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 AC068138.1-201ENST00000412635 217 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 DPPA3P2-202ENST00000557188 1219 ntBASIC9.42□□□□□ -0.9
TOPBP1Q92547 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TOPBP1Q92547 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
TOPBP1Q92547 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms