Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 WBP1LP3-201ENST00000523033 208 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 MTND2P17-201ENST00000550281 688 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 MIR1273E-201ENST00000581165 102 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC005244.1-201ENST00000582566 339 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AL713998.2-201ENST00000604538 1198 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC211433.2-201ENST00000608433 387 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 MIR6793-201ENST00000612376 63 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AL356752.1-201ENST00000615844 593 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC022726.2-201ENST00000634673 547 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 MAPK10-350ENST00000641777 965 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC106872.5-201ENST00000508856 1416 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AF287957.1-201ENST00000607368 1595 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC011369.2-201ENST00000624423 1567 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 AC119674.1-202ENST00000641333 1860 ntBASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HDDC3Q8N4P3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC007068.1-201ENST00000396690 844 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 RPS3AP2-201ENST00000407190 754 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 BX119321.1-201ENST00000428912 797 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 IGKV2-18-201ENST00000522607 343 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC022616.2-201ENST00000523185 300 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC022404.1-201ENST00000555320 273 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 MIR3189-201ENST00000578735 73 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC091193.1-201ENST00000604640 448 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC009779.8-201ENST00000641684 4384 ntBASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.12□□□□□ -1.43
HDDC3Q8N4P3 AC034229.2-201ENST00000566945 2508 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AC093909.5-201ENST00000621839 1799 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AL359091.1-201ENST00000449048 1734 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 MIR1178-201ENST00000408396 91 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AL353626.3-201ENST00000413399 657 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 MTND4LP17-201ENST00000414607 293 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.11□□□□□ -1.43
HDDC3Q8N4P3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms