Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H3F3CQ6NXT2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 OR52B3P-201ENST00000314715 928 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 RN7SKP128-201ENST00000364270 303 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC016739.1-201ENST00000405359 345 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 RANP7-201ENST00000418085 644 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC007562.1-201ENST00000421819 517 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AL136455.1-201ENST00000441083 1240 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC023274.2-201ENST00000445264 521 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 SNRPCP3-201ENST00000474888 476 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PPIAP19-201ENST00000486414 492 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 RPL23AP40-201ENST00000487630 390 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 MTATP6P1-201ENST00000514057 681 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 CYP4F27P-201ENST00000514557 494 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PCNAP4-201ENST00000532690 730 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 OR4H6P-201ENST00000563771 921 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC092121.1-201ENST00000569452 202 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 MIR4433B-201ENST00000581329 102 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC008521.2-201ENST00000591021 259 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 COX6CP7-201ENST00000597056 208 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AL512356.3-201ENST00000623005 461 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 DNM1P47-203ENST00000571780 12667 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 KARSP1-201ENST00000451871 1752 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 AC091305.2-201ENST00000624049 1576 ntBASIC5.55□□□□□ -1.52
H3F3CQ6NXT2 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC087516.1-201ENST00000561236 2428 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC016583.1-201ENST00000624221 2431 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 RNA5SP284-201ENST00000384547 118 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AL360271.1-201ENST00000395679 510 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 OR7E101P-201ENST00000400428 513 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC116036.1-201ENST00000412199 367 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 EEF1B2P8-201ENST00000414101 671 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 PCBP2P1-201ENST00000437262 977 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AL512637.1-201ENST00000439523 1231 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 RPL31P15-201ENST00000449770 338 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AL445665.1-202ENST00000452436 324 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 RAB28P2-201ENST00000454299 641 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 SETP20-201ENST00000457046 852 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AL022319.1-201ENST00000458183 1167 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC114781.3-201ENST00000512083 142 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 ZNF322P1-201ENST00000568013 1209 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms