Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 BMS1P13-201ENST00000417301 885 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC110749.1-201ENST00000462007 357 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 RN7SL57P-201ENST00000493687 290 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC105384.2-201ENST00000508433 640 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC002456.2-201ENST00000509356 380 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AC104695.2-201ENST00000605056 775 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 RN7SL544P-201ENST00000617232 284 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFX7Q2KHR2 RN7SL763P-201ENST00000620922 284 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 AL049767.1-202ENST00000637826 242 ntBASIC7.08□□□□□ -1.28
RFX7Q2KHR2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC034229.2-201ENST00000566945 2508 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 HMGB1P20-201ENST00000402555 677 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AL391361.1-201ENST00000405580 489 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 RPL34P27-201ENST00000428810 349 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC138866.2-201ENST00000508650 584 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC112191.2-201ENST00000522428 333 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 NANOGP3-201ENST00000605855 286 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 MIR193BHG-214ENST00000641765 509 ntBASIC7.07□□□□□ -1.28
RFX7Q2KHR2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFX7Q2KHR2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL158152.1-201ENST00000602652 1435 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MIR143-201ENST00000385300 106 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL391422.1-201ENST00000402155 436 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL121776.1-201ENST00000429337 372 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AL136038.1-201ENST00000497246 351 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 ATP5LP3-201ENST00000514223 304 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MIR2117-201ENST00000516780 80 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 CYCSP22-201ENST00000517555 339 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 MIR4489-201ENST00000578869 62 ntBASIC7.06□□□□□ -1.28
RFX7Q2KHR2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX7Q2KHR2 AP001267.4-201ENST00000602598 545 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms