Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OR51C1P-201ENST00000608504 942 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AL357562.1-201ENST00000624911 609 ntBASIC6.49□□□□□ -1.37
TPM4P67936 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 AC002525.1-201ENST00000624392 1622 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AC018717.1-201ENST00000457712 1505 ntBASIC6.49□□□□□ -1.37
TPM4P67936 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM4P67936 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TPM4P67936 PARP4P2-201ENST00000446672 3326 ntBASIC6.48□□□□□ -1.37
TPM4P67936 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TPM4P67936 AC010266.2-201ENST00000564741 3255 ntBASIC6.48□□□□□ -1.37
TPM4P67936 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.48□□□□□ -1.37
TPM4P67936 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 MFSD8-239ENST00000641590 2479 ntBASIC6.48□□□□□ -1.37
TPM4P67936 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 RPS4XP5-201ENST00000419038 768 ntBASIC6.48□□□□□ -1.37
TPM4P67936 HMGN1P32-201ENST00000441744 256 ntBASIC6.48□□□□□ -1.37
TPM4P67936 AL031681.1-201ENST00000443304 400 ntBASIC6.48□□□□□ -1.37
TPM4P67936 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM4P67936 AC117500.1-201ENST00000497352 755 ntBASIC6.48□□□□□ -1.37
TPM4P67936 AC105384.2-201ENST00000508433 640 ntBASIC6.48□□□□□ -1.37
TPM4P67936 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 AC021146.10-201ENST00000515628 706 ntBASIC6.48□□□□□ -1.37
TPM4P67936 SNORA74.1-201ENST00000516320 180 ntBASIC6.48□□□□□ -1.37
TPM4P67936 AP004609.2-201ENST00000532177 190 ntBASIC6.48□□□□□ -1.37
TPM4P67936 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM4P67936 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 AC024267.2-201ENST00000582737 417 ntBASIC6.48□□□□□ -1.37
TPM4P67936 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.48□□□□□ -1.37
TPM4P67936 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.48□□□□□ -1.37
TPM4P67936 AL049840.6-201ENST00000604583 345 ntBASIC6.48□□□□□ -1.37
TPM4P67936 RPSAP75-201ENST00000605848 301 ntBASIC6.48□□□□□ -1.37
TPM4P67936 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.48□□□□□ -1.37
TPM4P67936 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 AC112198.2-201ENST00000426589 6996 ntBASIC6.48□□□□□ -1.37
TPM4P67936 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 AP001029.2-203ENST00000589795 4910 ntBASIC6.48□□□□□ -1.37
TPM4P67936 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TPM4P67936 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.48□□□□□ -1.37
TPM4P67936 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 MAPK10-328ENST00000641553 4009 ntBASIC6.47□□□□□ -1.37
TPM4P67936 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM4P67936 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 LINC02019-201ENST00000608605 2060 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TPM4P67936 RNU1-134P-201ENST00000362935 165 ntBASIC6.47□□□□□ -1.37
TPM4P67936 RN7SKP145-201ENST00000363291 303 ntBASIC6.47□□□□□ -1.37
TPM4P67936 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TPM4P67936 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TPM4P67936 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 AC079809.1-201ENST00000415468 276 ntBASIC6.47□□□□□ -1.37
TPM4P67936 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 AC092646.1-201ENST00000427142 901 ntBASIC6.47□□□□□ -1.37
TPM4P67936 GAPDHP19-201ENST00000431768 1005 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AC128677.1-201ENST00000436016 442 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM4P67936 WDR82P2-201ENST00000444540 928 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AL590004.3-202ENST00000445883 451 ntBASIC6.47□□□□□ -1.37
TPM4P67936 RPS18P1-201ENST00000447840 458 ntBASIC6.47□□□□□ -1.37
TPM4P67936 RPS23P9-201ENST00000448848 438 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AC004129.2-201ENST00000457229 287 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM4P67936 CR383658.1-201ENST00000514609 734 ntBASIC6.47□□□□□ -1.37
TPM4P67936 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.47□□□□□ -1.37
TPM4P67936 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM4P67936 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 MIR212-201ENST00000586026 110 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AL139099.4-201ENST00000614802 114 ntBASIC6.47□□□□□ -1.37
TPM4P67936 MIR6133-201ENST00000617057 108 ntBASIC6.47□□□□□ -1.37
TPM4P67936 AC073488.3-201ENST00000631611 778 ntBASIC6.47□□□□□ -1.37
TPM4P67936 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TPM4P67936 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM4P67936 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
TPM4P67936 AC117409.1-201ENST00000470499 1310 ntBASIC6.47□□□□□ -1.37
TPM4P67936 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM4P67936 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM4P67936 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.46□□□□□ -1.37
TPM4P67936 AC083843.2-201ENST00000568248 6253 ntBASIC6.46□□□□□ -1.37
TPM4P67936 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.46□□□□□ -1.37
TPM4P67936 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.46□□□□□ -1.37
TPM4P67936 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
TPM4P67936 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TPM4P67936 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms