Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AC087752.1-201ENST00000391360 558 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AC010740.1-201ENST00000417035 684 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AC009506.2-201ENST00000420635 840 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 Z82198.3-201ENST00000421145 199 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AC138761.5-201ENST00000433967 325 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 RPS12P17-201ENST00000438591 377 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AL445466.1-201ENST00000448432 357 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 CEACAMP11-201ENST00000455211 583 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AC026782.2-201ENST00000510845 636 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.71□□□□□ -1.5
PKNOX1P55347 MAST4-IT1-201ENST00000514241 658 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 RNU2-45P-201ENST00000516068 187 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AL078601.3-201ENST00000573303 535 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 OOSP1P2-201ENST00000579644 351 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.71□□□□□ -1.5
PKNOX1P55347 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 AC145423.1-201ENST00000605712 336 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 NANOGP3-201ENST00000605855 286 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 AC073488.3-201ENST00000631611 778 ntBASIC5.71□□□□□ -1.5
PKNOX1P55347 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PKNOX1P55347 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKNOX1P55347 RN7SKP78-201ENST00000364711 318 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PKNOX1P55347 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PKNOX1P55347 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 RPL35AP3-201ENST00000414680 288 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AL158827.1-201ENST00000416300 391 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 DPPA2P2-201ENST00000418220 897 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.7□□□□□ -1.5
PKNOX1P55347 VN1R21P-201ENST00000426703 765 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC242426.1-201ENST00000435270 960 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 OR7E99P-201ENST00000505750 922 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 GUSBP9-201ENST00000510138 584 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKNOX1P55347 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.7□□□□□ -1.5
PKNOX1P55347 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC007346.1-201ENST00000569208 867 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 CCDC58P1-201ENST00000578567 430 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AC073333.2-201ENST00000603589 769 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 AL357140.4-201ENST00000636827 412 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.7□□□□□ -1.5
PKNOX1P55347 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
PKNOX1P55347 PARP4P2-201ENST00000446672 3326 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PKNOX1P55347 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PKNOX1P55347 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PKNOX1P55347 FBXL21-201ENST00000297158 1305 ntBASIC5.7□□□□□ -1.5
PKNOX1P55347 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PKNOX1P55347 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.7□□□□□ -1.5
PKNOX1P55347 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
PKNOX1P55347 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
PKNOX1P55347 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.69□□□□□ -1.5
PKNOX1P55347 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PKNOX1P55347 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PKNOX1P55347 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PKNOX1P55347 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PKNOX1P55347 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.69□□□□□ -1.5
PKNOX1P55347 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PKNOX1P55347 SELENOWP1-201ENST00000322792 252 ntBASIC5.69□□□□□ -1.5
PKNOX1P55347 MIR133A2-201ENST00000347538 102 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms