Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.5
CDH12P55289 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 NCOA4P2-201ENST00000340589 1813 ntBASIC5.65□□□□□ -1.5
CDH12P55289 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CDH12P55289 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDH12P55289 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDH12P55289 RNU6-1331P-201ENST00000363658 106 ntBASIC5.65□□□□□ -1.5
CDH12P55289 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CDH12P55289 AL157702.1-201ENST00000398764 426 ntBASIC5.65□□□□□ -1.5
CDH12P55289 ARAFP1-201ENST00000422172 605 ntBASIC5.65□□□□□ -1.5
CDH12P55289 OSTCP4-201ENST00000424397 449 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH12P55289 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AL022324.2-201ENST00000434827 780 ntBASIC5.65□□□□□ -1.5
CDH12P55289 PPIAP10-201ENST00000438675 458 ntBASIC5.65□□□□□ -1.5
CDH12P55289 POU5F1P5-201ENST00000445059 658 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 RPS4XP17-201ENST00000479057 754 ntBASIC5.65□□□□□ -1.5
CDH12P55289 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH12P55289 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CDH12P55289 AC092902.1-201ENST00000486999 259 ntBASIC5.65□□□□□ -1.5
CDH12P55289 TRBV5-2-201ENST00000489095 273 ntBASIC5.65□□□□□ -1.5
CDH12P55289 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH12P55289 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 KHDC1P1-201ENST00000511053 508 ntBASIC5.65□□□□□ -1.5
CDH12P55289 RNA5SP206-201ENST00000516703 121 ntBASIC5.65□□□□□ -1.5
CDH12P55289 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.65□□□□□ -1.5
CDH12P55289 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH12P55289 CYCSP25-201ENST00000525280 316 ntBASIC5.65□□□□□ -1.5
CDH12P55289 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH12P55289 TDGP1-201ENST00000543961 1229 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH12P55289 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 BNIP3P31-201ENST00000604515 566 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AC009237.12-201ENST00000604755 742 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH12P55289 AL591167.1-201ENST00000607321 456 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AC093388.1-201ENST00000609166 430 ntBASIC5.65□□□□□ -1.5
CDH12P55289 AL391834.2-201ENST00000609982 546 ntBASIC5.65□□□□□ -1.5
CDH12P55289 MIR6885-201ENST00000612241 66 ntBASIC5.65□□□□□ -1.5
CDH12P55289 GAPDHP41-201ENST00000613707 975 ntBASIC5.65□□□□□ -1.5
CDH12P55289 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH12P55289 AC000095.2-202ENST00000637415 154 ntBASIC5.65□□□□□ -1.5
CDH12P55289 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH12P55289 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CDH12P55289 CASC19-246ENST00000641625 1606 ntBASIC5.65□□□□□ -1.51
CDH12P55289 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDH12P55289 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH12P55289 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH12P55289 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH12P55289 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CDH12P55289 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH12P55289 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH12P55289 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH12P55289 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH12P55289 RNA5SP346-201ENST00000363541 121 ntBASIC5.64□□□□□ -1.51
CDH12P55289 YWHAZP4-201ENST00000392459 708 ntBASIC5.64□□□□□ -1.51
CDH12P55289 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 AL356057.1-202ENST00000402263 756 ntBASIC5.64□□□□□ -1.51
CDH12P55289 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH12P55289 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.64□□□□□ -1.51
CDH12P55289 SNORA77.2-201ENST00000408571 112 ntBASIC5.64□□□□□ -1.51
CDH12P55289 RN7SKP17-201ENST00000411242 351 ntBASIC5.64□□□□□ -1.51
CDH12P55289 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH12P55289 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH12P55289 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms