Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 MIR1286-201ENST00000408112 78 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGCS2P54868 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 NPM1P22-201ENST00000427761 952 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 PTMAP6-201ENST00000439110 327 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC079922.1-201ENST00000443291 359 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 RN7SL610P-201ENST00000463845 291 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC100832.1-201ENST00000471945 383 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 RNA5SP92-201ENST00000516437 110 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGCS2P54868 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGCS2P54868 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HMGCS2P54868 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGCS2P54868 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGCS2P54868 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 AC011497.2-201ENST00000600255 639 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC063977.5-201ENST00000601044 974 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC004948.1-201ENST00000609858 672 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AL589935.2-201ENST00000616471 1231 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.73□□□□□ -1.33
HMGCS2P54868 AL355377.1-201ENST00000621125 1653 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
HMGCS2P54868 MAPK10-261ENST00000641050 3109 ntBASIC6.73□□□□□ -1.33
HMGCS2P54868 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.73□□□□□ -1.33
HMGCS2P54868 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HMGCS2P54868 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 MFSD8-219ENST00000641228 2559 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 RNA5SP131-201ENST00000365452 119 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.72□□□□□ -1.33
HMGCS2P54868 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 OR5W1P-201ENST00000423705 938 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AL450996.1-201ENST00000445574 1202 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AL162739.1-201ENST00000450606 307 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AL603882.1-201ENST00000463059 681 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AC087672.1-201ENST00000479876 766 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 RN7SL727P-201ENST00000482164 296 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 RPS3AP15-201ENST00000483874 781 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGCS2P54868 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 RBM22P12-201ENST00000567098 1255 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AC015720.2-201ENST00000567709 334 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.72□□□□□ -1.33
HMGCS2P54868 MIR132-201ENST00000591554 101 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 MIR8080-201ENST00000622224 89 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.72□□□□□ -1.33
HMGCS2P54868 AC117409.1-201ENST00000470499 1310 ntBASIC6.72□□□□□ -1.33
HMGCS2P54868 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HMGCS2P54868 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HMGCS2P54868 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.71□□□□□ -1.33
HMGCS2P54868 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HMGCS2P54868 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HMGCS2P54868 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HMGCS2P54868 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HMGCS2P54868 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
HMGCS2P54868 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 SNORD8-201ENST00000363915 110 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 RNA5SP234-201ENST00000363916 119 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.71□□□□□ -1.34
HMGCS2P54868 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HMGCS2P54868 SNORA70-201ENST00000384436 135 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AL133173.1-201ENST00000423458 397 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 NANOGP4-201ENST00000427230 913 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.71□□□□□ -1.34
HMGCS2P54868 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGCS2P54868 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.71□□□□□ -1.34
HMGCS2P54868 LDHBP2-201ENST00000456969 1005 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 OR2AO1P-201ENST00000476497 403 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AC017007.3-201ENST00000479865 435 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AC093270.2-201ENST00000486157 792 ntBASIC6.71□□□□□ -1.34
HMGCS2P54868 AC006499.3-201ENST00000506077 748 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms