Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HNF4AP41235 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.93□□□□□ -1.46
HNF4AP41235 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HNF4AP41235 RPS26P38-201ENST00000414476 348 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.93□□□□□ -1.46
HNF4AP41235 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 AC108479.1-201ENST00000431142 427 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 GAPDHP59-201ENST00000435908 267 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AL390879.1-201ENST00000439143 386 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AC007383.1-201ENST00000445875 636 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.93□□□□□ -1.46
HNF4AP41235 OR7E22P-201ENST00000478335 1035 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 RPL34P33-201ENST00000486062 334 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AC008945.1-201ENST00000505144 499 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.93□□□□□ -1.46
HNF4AP41235 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.93□□□□□ -1.46
HNF4AP41235 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 AL078601.3-201ENST00000573303 535 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.93□□□□□ -1.46
HNF4AP41235 GLYATL1P2-202ENST00000588046 902 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AC141002.1-201ENST00000607025 279 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AC073575.2-201ENST00000614212 627 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 RFPL4AP6-201ENST00000616792 846 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 AC074140.1-201ENST00000621617 208 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.93□□□□□ -1.46
HNF4AP41235 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HNF4AP41235 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 AL591135.1-201ENST00000401578 5914 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HNF4AP41235 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.93□□□□□ -1.46
HNF4AP41235 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.92□□□□□ -1.46
HNF4AP41235 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.92□□□□□ -1.46
HNF4AP41235 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.92□□□□□ -1.46
HNF4AP41235 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HNF4AP41235 RNA5SP375-201ENST00000362975 119 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HNF4AP41235 YWHAZP6-201ENST00000399764 738 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 CYCSP51-201ENST00000443545 318 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.92□□□□□ -1.46
HNF4AP41235 AC107015.1-201ENST00000466902 747 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 AP002453.1-201ENST00000492327 668 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 AP000919.1-201ENST00000582850 985 ntBASIC5.92□□□□□ -1.46
HNF4AP41235 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.92□□□□□ -1.46
HNF4AP41235 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HNF4AP41235 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.92□□□□□ -1.46
HNF4AP41235 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.91□□□□□ -1.46
HNF4AP41235 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HNF4AP41235 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.91□□□□□ -1.46
HNF4AP41235 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HNF4AP41235 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.91□□□□□ -1.46
HNF4AP41235 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HNF4AP41235 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HNF4AP41235 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HNF4AP41235 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HNF4AP41235 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HNF4AP41235 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HNF4AP41235 RNA5SP198-201ENST00000410376 127 ntBASIC5.91□□□□□ -1.46
HNF4AP41235 RN7SKP86-201ENST00000410454 332 ntBASIC5.91□□□□□ -1.46
HNF4AP41235 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.91□□□□□ -1.46
HNF4AP41235 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.91□□□□□ -1.46
HNF4AP41235 AC092865.3-201ENST00000425390 1026 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms