Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SLC25A51P1-201ENST00000468432 871 ntBASIC6.71□□□□□ -1.34
CIITAP33076 RPL12P24-201ENST00000474907 486 ntBASIC6.71□□□□□ -1.34
CIITAP33076 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 AP000926.3-201ENST00000497201 299 ntBASIC6.71□□□□□ -1.34
CIITAP33076 AC006499.4-201ENST00000510947 694 ntBASIC6.71□□□□□ -1.34
CIITAP33076 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.71□□□□□ -1.34
CIITAP33076 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 AC093524.1-201ENST00000564266 1094 ntBASIC6.71□□□□□ -1.34
CIITAP33076 TMF1P1-201ENST00000576058 373 ntBASIC6.71□□□□□ -1.34
CIITAP33076 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 AC239803.2-201ENST00000610161 430 ntBASIC6.71□□□□□ -1.34
CIITAP33076 MIR6861-201ENST00000618657 64 ntBASIC6.71□□□□□ -1.34
CIITAP33076 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CIITAP33076 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
CIITAP33076 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CIITAP33076 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CIITAP33076 MTND3P20-201ENST00000407663 186 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.7□□□□□ -1.34
CIITAP33076 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.7□□□□□ -1.34
CIITAP33076 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.7□□□□□ -1.34
CIITAP33076 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 AC011476.1-201ENST00000466725 307 ntBASIC6.7□□□□□ -1.34
CIITAP33076 OR52A4P-202ENST00000481634 799 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AC112184.1-201ENST00000505179 312 ntBASIC6.7□□□□□ -1.34
CIITAP33076 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.7□□□□□ -1.34
CIITAP33076 AC114781.3-201ENST00000512083 142 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.7□□□□□ -1.34
CIITAP33076 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 GTF2IP11-201ENST00000526931 420 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AP003168.1-201ENST00000530091 307 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.7□□□□□ -1.34
CIITAP33076 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.7□□□□□ -1.34
CIITAP33076 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 MIR4310-201ENST00000582950 57 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 COX6CP7-201ENST00000597056 208 ntBASIC6.7□□□□□ -1.34
CIITAP33076 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.7□□□□□ -1.34
CIITAP33076 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.7□□□□□ -1.34
CIITAP33076 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CIITAP33076 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.7□□□□□ -1.34
CIITAP33076 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.7□□□□□ -1.34
CIITAP33076 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 AC073365.1-203ENST00000641055 1992 ntBASIC6.69□□□□□ -1.34
CIITAP33076 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CIITAP33076 MIPEPP2-201ENST00000422560 1819 ntBASIC6.69□□□□□ -1.34
CIITAP33076 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CIITAP33076 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CIITAP33076 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 AC023490.2-201ENST00000359859 470 ntBASIC6.69□□□□□ -1.34
CIITAP33076 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.69□□□□□ -1.34
CIITAP33076 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CIITAP33076 OR7E101P-201ENST00000400428 513 ntBASIC6.69□□□□□ -1.34
CIITAP33076 VN1R3-201ENST00000418822 919 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 BX323845.3-201ENST00000428215 527 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.69□□□□□ -1.34
CIITAP33076 AL663074.2-201ENST00000440621 479 ntBASIC6.69□□□□□ -1.34
CIITAP33076 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.69□□□□□ -1.34
CIITAP33076 AL603882.1-201ENST00000463059 681 ntBASIC6.69□□□□□ -1.34
CIITAP33076 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.69□□□□□ -1.34
CIITAP33076 RPL38P3-201ENST00000484463 213 ntBASIC6.69□□□□□ -1.34
CIITAP33076 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms