Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC244502.2-201ENST00000543361 851 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC007066.2-202ENST00000566531 914 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AC020916.2-201ENST00000591242 360 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.92□□□□□ -1.46
XRCC1P18887 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 AL136228.1-201ENST00000622221 319 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 GNL2P1-201ENST00000451274 2190 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 RBPJP7-201ENST00000442803 1447 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 RBPJP5-201ENST00000449433 1447 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC140479.2-201ENST00000421567 3130 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 PSG10P-201ENST00000501199 1500 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 RNA5SP477-201ENST00000362639 119 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC073410.1-201ENST00000435125 589 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 VN1R110P-201ENST00000438988 971 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 REG1CP-206ENST00000447469 496 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 AL445466.1-201ENST00000448432 357 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 OR5H7P-201ENST00000514084 930 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 SCARNA18.1-201ENST00000516330 83 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 OR56A7P-201ENST00000524865 941 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 TRIM51DP-201ENST00000529746 596 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC016252.1-201ENST00000609721 474 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.91□□□□□ -1.46
XRCC1P18887 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.91□□□□□ -1.46
XRCC1P18887 AC083837.1-201ENST00000565297 2994 ntBASIC5.91□□□□□ -1.46
XRCC1P18887 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
XRCC1P18887 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XRCC1P18887 AC232271.1-201ENST00000602455 2715 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.9□□□□□ -1.46
XRCC1P18887 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
XRCC1P18887 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 AC119674.1-202ENST00000641333 1860 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
XRCC1P18887 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 RNA5SP273-201ENST00000362484 113 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
XRCC1P18887 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 AL096711.1-201ENST00000404780 554 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 SLC20A1P1-201ENST00000413906 956 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.9□□□□□ -1.46
XRCC1P18887 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 GAPDHP75-201ENST00000433910 943 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 TUBB4BP6-201ENST00000437576 479 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 AC016027.4-201ENST00000450866 277 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
XRCC1P18887 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.9□□□□□ -1.46
XRCC1P18887 AC083795.1-201ENST00000491760 320 ntBASIC5.9□□□□□ -1.46
XRCC1P18887 TOMM22P4-201ENST00000511318 336 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms