Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP006222.1-205ENST00000450734 457 ntBASIC6.94□□□□□ -1.3
TOP1P11387 AL358876.1-201ENST00000453364 1075 ntBASIC6.94□□□□□ -1.3
TOP1P11387 AC128716.1-201ENST00000475129 166 ntBASIC6.94□□□□□ -1.3
TOP1P11387 PSMA2P2-201ENST00000504319 686 ntBASIC6.94□□□□□ -1.3
TOP1P11387 UGT2A3P7-201ENST00000510485 734 ntBASIC6.94□□□□□ -1.3
TOP1P11387 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.94□□□□□ -1.3
TOP1P11387 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.94□□□□□ -1.3
TOP1P11387 OR4A42P-201ENST00000531397 938 ntBASIC6.94□□□□□ -1.3
TOP1P11387 HNRNPCP1-201ENST00000556181 766 ntBASIC6.94□□□□□ -1.3
TOP1P11387 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.94□□□□□ -1.3
TOP1P11387 ZNF322P1-201ENST00000568013 1209 ntBASIC6.94□□□□□ -1.3
TOP1P11387 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.94□□□□□ -1.3
TOP1P11387 AL049840.6-201ENST00000604583 345 ntBASIC6.94□□□□□ -1.3
TOP1P11387 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 DNM1P47-203ENST00000571780 12667 ntBASIC6.94□□□□□ -1.3
TOP1P11387 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 XKRY2-202ENST00000623874 1581 ntBASIC6.94□□□□□ -1.3
TOP1P11387 XKRY-202ENST00000624960 1581 ntBASIC6.94□□□□□ -1.3
TOP1P11387 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.94□□□□□ -1.3
TOP1P11387 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
TOP1P11387 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP1P11387 PARP4P2-201ENST00000446672 3326 ntBASIC6.93□□□□□ -1.3
TOP1P11387 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TOP1P11387 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP1P11387 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP1P11387 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP1P11387 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TOP1P11387 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TOP1P11387 RNA5SP500-201ENST00000364486 119 ntBASIC6.93□□□□□ -1.3
TOP1P11387 RNA5SP510-201ENST00000364697 99 ntBASIC6.93□□□□□ -1.3
TOP1P11387 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.93□□□□□ -1.3
TOP1P11387 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 AC021876.1-201ENST00000425959 359 ntBASIC6.93□□□□□ -1.3
TOP1P11387 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP1P11387 CUBNP2-201ENST00000443534 1139 ntBASIC6.93□□□□□ -1.3
TOP1P11387 AC016724.1-201ENST00000453215 421 ntBASIC6.93□□□□□ -1.3
TOP1P11387 SNORD46.2-201ENST00000516021 102 ntBASIC6.93□□□□□ -1.3
TOP1P11387 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP1P11387 AC008429.4-201ENST00000521201 182 ntBASIC6.93□□□□□ -1.3
TOP1P11387 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP1P11387 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP1P11387 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.93□□□□□ -1.3
TOP1P11387 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP1P11387 MIR4420-201ENST00000583944 77 ntBASIC6.93□□□□□ -1.3
TOP1P11387 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.93□□□□□ -1.3
TOP1P11387 AC145423.1-201ENST00000605712 336 ntBASIC6.93□□□□□ -1.3
TOP1P11387 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.93□□□□□ -1.3
TOP1P11387 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TOP1P11387 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.93□□□□□ -1.3
TOP1P11387 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TOP1P11387 PDZK1P1-202ENST00000425209 1350 ntBASIC6.93□□□□□ -1.3
TOP1P11387 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOP1P11387 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TOP1P11387 OFD1P17-201ENST00000437639 3018 ntBASIC6.93□□□□□ -1.3
TOP1P11387 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.92□□□□□ -1.3
TOP1P11387 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
TOP1P11387 AC245060.4-201ENST00000413293 1121 ntBASIC6.92□□□□□ -1.3
TOP1P11387 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 RPL23AP19-201ENST00000436229 369 ntBASIC6.92□□□□□ -1.3
TOP1P11387 RPS12P17-201ENST00000438591 377 ntBASIC6.92□□□□□ -1.3
TOP1P11387 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 AC022826.1-201ENST00000519383 805 ntBASIC6.92□□□□□ -1.3
TOP1P11387 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.92□□□□□ -1.3
TOP1P11387 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.92□□□□□ -1.3
TOP1P11387 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
TOP1P11387 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.92□□□□□ -1.3
TOP1P11387 RPL12P48-201ENST00000605620 304 ntBASIC6.92□□□□□ -1.3
TOP1P11387 AL139099.4-201ENST00000614802 114 ntBASIC6.92□□□□□ -1.3
TOP1P11387 AC069234.4-201ENST00000621276 412 ntBASIC6.92□□□□□ -1.3
TOP1P11387 OR8G3P-202ENST00000641572 1255 ntBASIC6.92□□□□□ -1.3
TOP1P11387 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TOP1P11387 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
TOP1P11387 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 AL161901.1-201ENST00000624954 3425 ntBASIC6.92□□□□□ -1.3
TOP1P11387 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOP1P11387 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 WDR95P-201ENST00000425638 1542 ntBASIC6.91□□□□□ -1.3
TOP1P11387 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
TOP1P11387 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.91□□□□□ -1.3
TOP1P11387 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms