Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.74□□□□□ -1.49
TNFP01375 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFP01375 MIR4505-201ENST00000582238 73 ntBASIC5.74□□□□□ -1.49
TNFP01375 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFP01375 AL691477.1-201ENST00000624398 162 ntBASIC5.74□□□□□ -1.49
TNFP01375 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 AL121768.1-201ENST00000613917 2544 ntBASIC5.74□□□□□ -1.49
TNFP01375 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TNFP01375 WBP11P1-201ENST00000562560 1931 ntBASIC5.74□□□□□ -1.49
TNFP01375 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFP01375 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TNFP01375 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
TNFP01375 AL669831.5-218ENST00000591702 1873 ntBASIC5.73□□□□□ -1.49
TNFP01375 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
TNFP01375 RNA5SP46-201ENST00000362370 120 ntBASIC5.73□□□□□ -1.49
TNFP01375 MIR143-201ENST00000385300 106 ntBASIC5.73□□□□□ -1.49
TNFP01375 RN7SKP229-201ENST00000410465 302 ntBASIC5.73□□□□□ -1.49
TNFP01375 AL121776.1-201ENST00000429337 372 ntBASIC5.73□□□□□ -1.49
TNFP01375 RPS12P17-201ENST00000438591 377 ntBASIC5.73□□□□□ -1.49
TNFP01375 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 OR7E157P-201ENST00000494376 911 ntBASIC5.73□□□□□ -1.49
TNFP01375 MIR2117-201ENST00000516780 80 ntBASIC5.73□□□□□ -1.49
TNFP01375 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFP01375 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 AC018558.5-201ENST00000565840 952 ntBASIC5.73□□□□□ -1.49
TNFP01375 AC109309.2-201ENST00000612597 332 ntBASIC5.73□□□□□ -1.49
TNFP01375 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFP01375 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFP01375 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
TNFP01375 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.73□□□□□ -1.49
TNFP01375 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFP01375 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFP01375 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 AP002833.3-201ENST00000625075 2265 ntBASIC5.72□□□□□ -1.49
TNFP01375 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TNFP01375 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TNFP01375 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TNFP01375 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 AC005522.1-201ENST00000395416 346 ntBASIC5.72□□□□□ -1.49
TNFP01375 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFP01375 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 AP000281.1-201ENST00000444036 316 ntBASIC5.72□□□□□ -1.49
TNFP01375 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.72□□□□□ -1.49
TNFP01375 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.72□□□□□ -1.49
TNFP01375 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
TNFP01375 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.72□□□□□ -1.49
TNFP01375 RNU6-615P-201ENST00000516065 106 ntBASIC5.72□□□□□ -1.49
TNFP01375 SCARNA21.2-201ENST00000516600 166 ntBASIC5.72□□□□□ -1.49
TNFP01375 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.72□□□□□ -1.49
TNFP01375 IGLV3-30-201ENST00000524362 298 ntBASIC5.72□□□□□ -1.49
TNFP01375 HMGB1P42-201ENST00000532126 553 ntBASIC5.72□□□□□ -1.49
TNFP01375 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.72□□□□□ -1.49
TNFP01375 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFP01375 FO393422.1-201ENST00000603908 708 ntBASIC5.72□□□□□ -1.49
TNFP01375 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.72□□□□□ -1.49
TNFP01375 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFP01375 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFP01375 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFP01375 AC022034.1-201ENST00000512867 2156 ntBASIC5.72□□□□□ -1.49
TNFP01375 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TNFP01375 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.71□□□□□ -1.49
TNFP01375 AC027279.1-201ENST00000568885 4284 ntBASIC5.71□□□□□ -1.49
TNFP01375 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TNFP01375 AC130304.1-201ENST00000622942 2385 ntBASIC5.71□□□□□ -1.5
TNFP01375 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFP01375 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFP01375 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFP01375 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFP01375 AC019205.1-201ENST00000421830 730 ntBASIC5.71□□□□□ -1.5
TNFP01375 AL662874.1-201ENST00000426065 230 ntBASIC5.71□□□□□ -1.5
TNFP01375 Z84478.1-201ENST00000438230 1219 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms