Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.91□□□□□ -1.46
LDLRP01130 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.91□□□□□ -1.46
LDLRP01130 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 AC073488.6-201ENST00000632293 754 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC000095.2-202ENST00000637415 154 ntBASIC5.91□□□□□ -1.46
LDLRP01130 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.91□□□□□ -1.46
LDLRP01130 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LDLRP01130 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LDLRP01130 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.9□□□□□ -1.46
LDLRP01130 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LDLRP01130 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LDLRP01130 SLC20A1P1-201ENST00000413906 956 ntBASIC5.9□□□□□ -1.46
LDLRP01130 GAPDHP75-201ENST00000433910 943 ntBASIC5.9□□□□□ -1.46
LDLRP01130 VPS25P1-201ENST00000455691 508 ntBASIC5.9□□□□□ -1.46
LDLRP01130 NXT1P1-201ENST00000458481 316 ntBASIC5.9□□□□□ -1.46
LDLRP01130 PPIAP19-201ENST00000486414 492 ntBASIC5.9□□□□□ -1.46
LDLRP01130 RPL19P11-201ENST00000495944 589 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC018645.1-201ENST00000505003 109 ntBASIC5.9□□□□□ -1.46
LDLRP01130 GOLGA5P1-201ENST00000507317 980 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC093815.1-201ENST00000508637 280 ntBASIC5.9□□□□□ -1.46
LDLRP01130 CCNHP1-201ENST00000513311 678 ntBASIC5.9□□□□□ -1.46
LDLRP01130 CYP4F27P-201ENST00000514557 494 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.9□□□□□ -1.46
LDLRP01130 AC027369.2-201ENST00000528030 440 ntBASIC5.9□□□□□ -1.46
LDLRP01130 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.9□□□□□ -1.46
LDLRP01130 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.9□□□□□ -1.46
LDLRP01130 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.9□□□□□ -1.46
LDLRP01130 AC135626.1-201ENST00000556983 435 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.9□□□□□ -1.46
LDLRP01130 GMCL1P2-201ENST00000605230 823 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC004890.3-201ENST00000605566 1095 ntBASIC5.9□□□□□ -1.46
LDLRP01130 AC100814.1-201ENST00000606963 623 ntBASIC5.9□□□□□ -1.46
LDLRP01130 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.9□□□□□ -1.46
LDLRP01130 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.9□□□□□ -1.46
LDLRP01130 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LDLRP01130 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.9□□□□□ -1.47
LDLRP01130 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.9□□□□□ -1.47
LDLRP01130 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LDLRP01130 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LDLRP01130 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
LDLRP01130 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.9□□□□□ -1.47
LDLRP01130 AC005702.3-201ENST00000585345 1447 ntBASIC5.9□□□□□ -1.47
LDLRP01130 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LDLRP01130 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LDLRP01130 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LDLRP01130 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 AC020656.2-201ENST00000613291 5309 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
LDLRP01130 OR7E25P-201ENST00000344844 931 ntBASIC5.89□□□□□ -1.47
LDLRP01130 LYPLA1P3-201ENST00000402650 695 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AL139805.1-201ENST00000407837 289 ntBASIC5.89□□□□□ -1.47
LDLRP01130 RN7SKP144-201ENST00000411108 279 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 BMS1P13-201ENST00000417301 885 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC066692.1-201ENST00000421721 457 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 BMS1P10-201ENST00000443754 1120 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 AP002453.1-201ENST00000492327 668 ntBASIC5.89□□□□□ -1.47
LDLRP01130 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.89□□□□□ -1.47
LDLRP01130 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LDLRP01130 AC078878.1-201ENST00000539832 958 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC090022.1-201ENST00000546569 311 ntBASIC5.89□□□□□ -1.47
LDLRP01130 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.89□□□□□ -1.47
LDLRP01130 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 AC107993.1-201ENST00000591343 684 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 AC004805.3-201ENST00000603178 310 ntBASIC5.89□□□□□ -1.47
LDLRP01130 RPL12P48-201ENST00000605620 304 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.89□□□□□ -1.47
LDLRP01130 MIR6811-201ENST00000620409 58 ntBASIC5.89□□□□□ -1.47
LDLRP01130 AC024884.1-201ENST00000620583 399 ntBASIC5.89□□□□□ -1.47
LDLRP01130 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.89□□□□□ -1.47
LDLRP01130 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LDLRP01130 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms