Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC021193.1-201ENST00000511607 420 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 NDUFB4P12-201ENST00000513465 390 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 MTCYBP44-201ENST00000514835 823 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 GAPDHP62-201ENST00000515313 990 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 IGHVII-22-1-201ENST00000517888 265 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC078899.1-201ENST00000521432 1185 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AP002383.5-201ENST00000542623 1161 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC244502.2-201ENST00000543361 851 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC092865.1-201ENST00000544395 1023 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 LYZ-202ENST00000548839 558 ntTSL 2 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC027229.1-201ENST00000583887 253 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 SCML2P1-201ENST00000584511 1100 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC087468.1-201ENST00000604365 630 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM27E3-202ENST00000614611 340 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AL356752.1-201ENST00000615844 593 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005790.1-201ENST00000619774 450 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AP003499.2-201ENST00000624100 483 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073488.3-201ENST00000631611 778 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 HCCAT5-202ENST00000642127 1029 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 MTND5P12-201ENST00000502851 1449 ntBASIC3.1□□□□□ -1.91
CHKB-CPT1BH3BT56 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 TET1P1-201ENST00000426627 2301 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR708-201ENST00000390708 88 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL10P10-201ENST00000403509 664 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL5P20-201ENST00000403848 896 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SKP236-201ENST00000410635 284 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL6P21-201ENST00000418672 846 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 SNRPEP5-201ENST00000425442 278 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 VN1R21P-201ENST00000426703 765 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RPS10P21-201ENST00000430654 475 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CFL1P4-201ENST00000451536 498 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 PCMTD1P3-201ENST00000451824 472 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC093166.4-201ENST00000457867 318 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL58P-201ENST00000473445 294 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC127024.1-201ENST00000490847 418 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 UBA52P3-201ENST00000491303 382 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL580P-201ENST00000492489 287 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 RNU6-964P-201ENST00000516524 69 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 IGKV2D-38-201ENST00000518423 240 ntBASIC3.09□□□□□ -1.91
CHKB-CPT1BH3BT56 AC021820.1-201ENST00000525564 808 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms