Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 BMS1P9-201ENST00000457640 885 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 SNORD125-201ENST00000459538 96 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC006539.1-201ENST00000481419 501 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC021146.10-201ENST00000515628 706 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC027026.1-201ENST00000532323 742 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC026956.1-201ENST00000558741 396 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 COX6CP7-201ENST00000597056 208 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC103703.1-201ENST00000634783 663 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
RBFOX3A6NFN3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 THAP12P5-201ENST00000405864 2275 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 OR9K1P-201ENST00000326513 941 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RNA5SP152-201ENST00000365184 110 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL672212.1-201ENST00000422246 400 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RPS7P14-201ENST00000426405 583 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 VN1R21P-201ENST00000426703 765 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC083862.1-201ENST00000427378 1242 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL512593.1-201ENST00000444758 779 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RBMY2AP-201ENST00000445405 1157 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RBMY2CP-201ENST00000448575 1157 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RBMY2DP-202ENST00000448881 1157 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC009244.1-201ENST00000450566 258 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 UOX-201ENST00000471089 899 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RN7SL369P-201ENST00000477138 299 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 MTCO1P55-201ENST00000489829 745 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL049874.2-201ENST00000492636 288 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 MIR2117-201ENST00000516780 80 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 Y_RNA.710-201ENST00000516975 110 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC127024.5-201ENST00000580085 462 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 MIR7853-201ENST00000584820 132 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 NANOGP3-201ENST00000605855 286 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL139124.1-201ENST00000609123 421 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC104623.2-202ENST00000623477 4002 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TCP1P3-201ENST00000414406 1498 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC079248.1-201ENST00000427568 1546 ntBASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RBFOX3A6NFN3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms