Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 DOCK11P1-201ENST00000553480 5932 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 OR4K17-201ENST00000315543 1032 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 GAPDHP15-201ENST00000398586 975 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC003045.1-201ENST00000398779 713 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RN7SKP86-201ENST00000410454 332 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RNU4-27P-201ENST00000410889 139 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL590806.1-201ENST00000415818 853 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL23AP4-201ENST00000427757 463 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 MRPL50P1-201ENST00000431951 384 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL7P55-201ENST00000450522 746 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 RN7SL168P-201ENST00000463821 279 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 IGKV2-4-201ENST00000523070 340 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL049870.4-201ENST00000555741 486 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC107958.1-201ENST00000556576 290 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC244034.2-201ENST00000562504 509 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC126365.2-201ENST00000580630 379 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC011497.2-201ENST00000600255 639 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC004477.3-201ENST00000614061 590 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02495-203ENST00000636704 242 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 AC022034.1-201ENST00000512867 2156 ntBASIC7.18□□□□□ -1.26
COL4A3BPQ9Y5P4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 HSPA8P19-201ENST00000505359 1517 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 SAGE3P-201ENST00000619800 1635 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 RNA5SP232-201ENST00000364144 119 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 RN7SKP187-201ENST00000365536 330 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AL158050.1-201ENST00000416077 457 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 HSFY1P1-201ENST00000423928 1178 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC097721.1-201ENST00000427150 1253 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL6P5-201ENST00000445678 828 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 FCF1P6-201ENST00000456841 595 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 CCNJP2-201ENST00000457810 1163 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 SNX18P25-201ENST00000510539 758 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC112198.4-201ENST00000515450 351 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 RN7SKP141-201ENST00000516167 338 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 RNA5SP473-201ENST00000516402 125 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC023968.1-201ENST00000560719 475 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AP003117.1-201ENST00000602771 554 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms