Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 RPL35AP24-201ENST00000413846 330 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 PRUNEP1-201ENST00000425846 705 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 RN7SL222P-201ENST00000476452 299 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 GSTP1P1-201ENST00000548078 319 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 CR383656.6-201ENST00000550518 394 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 RBM22P12-201ENST00000567098 1255 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SHANK2Q9UPX8 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 AZGP1P2-201ENST00000454506 345 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 CDC42P3-201ENST00000518493 633 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 AC004825.1-201ENST00000555068 586 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 SUGT1P3-202ENST00000604259 383 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 AL139805.2-201ENST00000455305 2433 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 MFSD8-219ENST00000641228 2559 ntBASIC8.59□□□□□ -1.03
SHANK2Q9UPX8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.04
SHANK2Q9UPX8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC005042.1-201ENST00000393397 800 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 RAB28P1-201ENST00000411517 641 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 FAR2P2-201ENST00000413041 594 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 FAR2P4-202ENST00000425399 584 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 OR6D1P-201ENST00000436165 939 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC019185.1-201ENST00000442718 389 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 FAR2P1-206ENST00000449736 709 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 RPL7P61-201ENST00000451721 751 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC023818.1-201ENST00000498379 384 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC021678.3-201ENST00000517893 476 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 IMMTP1-201ENST00000435590 2219 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 CASC19-248ENST00000641674 1356 ntBASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SHANK2Q9UPX8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 RNA5SP251-201ENST00000410614 137 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 VN1R54P-201ENST00000435210 1049 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AL772161.1-201ENST00000439130 476 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC090142.2-201ENST00000483263 416 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 TRBV5-2-201ENST00000489095 273 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 CEACAMP10-202ENST00000495431 496 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC093890.1-201ENST00000502554 540 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 RN7SKP66-201ENST00000516681 231 ntBASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.57□□□□□ -1.04
SHANK2Q9UPX8 AC015720.2-201ENST00000567709 334 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms