Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RPL23AP17-201ENST00000401064 499 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 RPS21P8-201ENST00000413365 247 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 RPL23AP40-201ENST00000487630 390 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 MTATP6P1-201ENST00000514057 681 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC020978.7-201ENST00000575953 1187 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 MIR132-201ENST00000591554 101 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 AC026124.2-201ENST00000621847 656 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC88CQ9P219 OFD1P17-201ENST00000437639 3018 ntBASIC5.62□□□□□ -1.51
CCDC88CQ9P219 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 OR6E1P-201ENST00000414424 923 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 RN7SL214P-201ENST00000487317 265 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 TRBV5-2-201ENST00000489095 273 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC083795.1-201ENST00000491760 320 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC126175.1-201ENST00000617041 758 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC021422.1-201ENST00000621212 473 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC022919.1-201ENST00000624979 626 ntBASIC5.61□□□□□ -1.51
CCDC88CQ9P219 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC88CQ9P219 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC245060.4-201ENST00000413293 1121 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RPL34P27-201ENST00000428810 349 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 BX679664.2-201ENST00000439282 283 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AL158068.1-201ENST00000506116 616 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RNA5SP362-201ENST00000516048 118 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 IGLV3-30-201ENST00000524362 298 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC093297.3-201ENST00000607056 2517 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RN7SKP128-201ENST00000364270 303 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AL121977.1-201ENST00000401636 979 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 SNRPEP6-201ENST00000407465 277 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RN7SKP286-201ENST00000410894 299 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 ACA64.1-201ENST00000459171 127 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 RPL32P33-201ENST00000487023 394 ntBASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC88CQ9P219 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms