Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 Z93929.1-201ENST00000418200 1475 ntBASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 QRSL1P1-201ENST00000400977 1540 ntBASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CUEDC1Q9NWM3 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 Y_RNA.18-201ENST00000362461 102 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 Y_RNA.402-201ENST00000383972 102 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 XKRYP4-201ENST00000414395 483 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 RPL23AP39-201ENST00000415533 405 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 PTP4A1P1-201ENST00000420539 515 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 RPL23AP34-201ENST00000423483 410 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 PHBP4-201ENST00000437447 837 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 MTCYBP6-201ENST00000441810 138 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC023512.1-201ENST00000444513 499 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 XKRYP5-201ENST00000449659 483 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 DDX39BP2-208ENST00000453923 258 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC013787.1-201ENST00000460165 307 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 RN7SL740P-201ENST00000467060 344 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 RN7SL815P-201ENST00000470970 290 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC018639.1-201ENST00000492994 442 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 OR5AQ1P-201ENST00000527596 927 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC093012.1-202ENST00000549403 582 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC063977.5-201ENST00000601044 974 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AL020991.1-201ENST00000612314 373 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC138649.3-201ENST00000622154 254 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC000367.1-201ENST00000452711 1766 ntBASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.66□□□□□ -1.18
CUEDC1Q9NWM3 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 ZNF300P1-201ENST00000356555 1822 ntBASIC7.65□□□□□ -1.18
CUEDC1Q9NWM3 RNA5SP378-201ENST00000363646 120 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms