Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC126773.4-201ENST00000612545 3043 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 EEF1A1P4-201ENST00000359165 1405 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC006020.1-201ENST00000420179 1854 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 TNFSF15-201ENST00000374044 2789 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 ST7-213ENST00000432298 1956 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 ACTR3C-206ENST00000613959 5142 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU4-39P-201ENST00000362455 127 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNA5SP389-201ENST00000362610 115 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNA5SP226-201ENST00000362653 115 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 Y_RNA.166-201ENST00000363730 102 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-200P-201ENST00000364743 107 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNA5SP149-201ENST00000364952 92 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AL450124.1-201ENST00000376401 353 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 SNORA51.7-201ENST00000384171 134 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-886P-201ENST00000384319 105 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 Z97832.1-201ENST00000402490 328 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MIR1231-201ENST00000408101 92 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MIR1302-4-201ENST00000408701 150 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-920P-201ENST00000410926 92 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AMD1P2-201ENST00000412936 992 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AL773545.3-201ENST00000414297 706 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC009237.9-201ENST00000414800 347 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC244033.1-201ENST00000426826 870 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AL590233.1-201ENST00000430017 456 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC002486.1-201ENST00000435098 391 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC019185.3-201ENST00000438805 323 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 H2AFZP6-201ENST00000444403 394 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC239860.1-201ENST00000444680 1270 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CYCSP24-201ENST00000445119 316 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 GCNT1P5-201ENST00000449274 682 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 PSPHP1-201ENST00000450062 261 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC091685.2-201ENST00000454924 864 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RN7SL213P-201ENST00000463482 317 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC021660.1-201ENST00000465006 554 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC022730.2-201ENST00000465359 452 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC092324.1-201ENST00000468671 324 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RPL7P19-201ENST00000469948 618 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 PA2G4P4-201ENST00000473864 1182 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RPL7AP56-201ENST00000476420 791 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC018475.1-201ENST00000478358 465 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC009269.1-202ENST00000484381 469 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RPL7P51-201ENST00000490532 749 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AP000926.3-201ENST00000497201 299 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC008629.2-201ENST00000503783 483 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AF186996.3-201ENST00000509527 964 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC109811.2-201ENST00000509609 452 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC138866.1-201ENST00000514522 497 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-346P-201ENST00000516288 111 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-313P-201ENST00000516317 112 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 RNU6-1212P-201ENST00000517023 104 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 TPM3P3-201ENST00000521343 354 ntBASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.69□□□□□ -1.98
KRTAP4-3Q9BYR4 PDCL2P2-201ENST00000533651 189 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms