Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 RN7SKP128-201ENST00000364270 303 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 TRIM60P17-201ENST00000415181 719 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 UBE2V1P14-201ENST00000415815 558 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 BMS1P17-202ENST00000416720 316 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC013470.3-201ENST00000420252 1194 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 RAB9AP5-201ENST00000437794 597 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 SDR42E1P3-201ENST00000438345 502 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 RAB9AP2-201ENST00000443911 597 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC016027.4-201ENST00000450866 277 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 MTND1P36-201ENST00000522384 936 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 OR4V1P-201ENST00000525394 1140 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC090651.1-201ENST00000567865 634 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 MTND2P13-201ENST00000577438 1039 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC040174.2-201ENST00000602701 465 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC073111.2-201ENST00000605657 1075 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AL137067.2-201ENST00000621202 131 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC120036.2-201ENST00000509729 1474 ntBASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.42□□□□□ -1.22
RTFDC1Q9BY42 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 MAPK10-261ENST00000641050 3109 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 SNORA58B-201ENST00000364259 136 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 MIR105-2-201ENST00000385083 81 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC016739.1-201ENST00000405359 345 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AMZ2P2-201ENST00000406819 1057 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 RAB9AP4-201ENST00000415230 609 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 CYP4F30P-202ENST00000420048 405 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 RPL17P35-201ENST00000432217 549 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC073909.1-201ENST00000447112 999 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC115223.1-201ENST00000466377 870 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 EIF3LP3-201ENST00000495197 822 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 OOSP1P2-201ENST00000579644 351 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 BNIP3P32-201ENST00000600015 554 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 FO393422.1-201ENST00000603908 708 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 SUMO2P15-201ENST00000604285 278 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC020765.1-201ENST00000604296 328 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC005261.6-201ENST00000623072 1387 ntBASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.41□□□□□ -1.22
RTFDC1Q9BY42 AC027279.4-201ENST00000624371 2072 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 SELENOWP1-201ENST00000322792 252 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 OR9K1P-201ENST00000326513 941 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RNA5SP46-201ENST00000362370 120 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 RNU4-39P-201ENST00000362455 127 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 SNORA27.3-201ENST00000364937 134 ntBASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RTFDC1Q9BY42 AL391422.1-201ENST00000402155 436 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms