Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 RNU1-106P-201ENST00000384382 164 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 AL109941.1-201ENST00000401925 229 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 VN1R54P-201ENST00000435210 1049 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.78□□□□□ -1
SCAPERQ9BY12 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.78□□□□□ -1
SCAPERQ9BY12 BX284632.1-201ENST00000478218 541 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 RNA5SP228-201ENST00000516232 133 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 AC126177.5-201ENST00000549599 178 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 MRPS21P7-201ENST00000566937 238 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 MIR4436B2-201ENST00000581415 91 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.78□□□□□ -1
SCAPERQ9BY12 MIR4436B1-201ENST00000583272 91 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 MIR6810-201ENST00000622701 70 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 AP001784.1-201ENST00000624107 428 ntBASIC8.78□□□□□ -1
SCAPERQ9BY12 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
SCAPERQ9BY12 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
SCAPERQ9BY12 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
SCAPERQ9BY12 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
SCAPERQ9BY12 AL589993.1-201ENST00000407450 2524 ntBASIC8.77□□□□□ -1
SCAPERQ9BY12 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
SCAPERQ9BY12 TNPO1P2-201ENST00000426249 2665 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 AC009784.1-201ENST00000426484 460 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 CYCSP6-201ENST00000434498 302 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 AC073610.1-201ENST00000489971 396 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 HSPE1P2-201ENST00000554777 306 ntBASIC8.77□□□□□ -1.01
SCAPERQ9BY12 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SCAPERQ9BY12 SALL4P7-201ENST00000555779 3120 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC006213.6-201ENST00000623722 4179 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 MAPK10-365ENST00000641902 3825 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 RNU1-77P-201ENST00000390868 162 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AL645733.1-201ENST00000402250 217 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 RN7SKP279-201ENST00000411383 298 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC103563.5-201ENST00000455643 364 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AC087763.1-201ENST00000603391 286 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 CDY5P-201ENST00000411487 1580 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 CDY9P-201ENST00000451397 1580 ntBASIC8.76□□□□□ -1.01
SCAPERQ9BY12 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SCAPERQ9BY12 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AC092724.1-201ENST00000624623 3397 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 RPL23P2-201ENST00000320371 421 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 RNA5SP30-201ENST00000365552 115 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AL589647.1-201ENST00000402485 466 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 NENFP1-201ENST00000419476 466 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 OR13K1P-201ENST00000444577 975 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 CBX1P2-201ENST00000453841 458 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AP000547.1-201ENST00000454360 617 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 RPL7P45-201ENST00000455851 743 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 RPL23AP40-201ENST00000487630 390 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 CCDC11P1-201ENST00000503137 1162 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 TPM3P3-201ENST00000521343 354 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AC007494.1-201ENST00000562293 760 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 OR1F2P-201ENST00000570470 933 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 MIR3691-201ENST00000578066 90 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 CYCSP1-201ENST00000604815 315 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AC132068.1-201ENST00000623805 459 ntBASIC8.75□□□□□ -1.01
SCAPERQ9BY12 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
SCAPERQ9BY12 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms